Streptomyces rectiverticillatus: FGW37_27895
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Entry
FGW37_27895 CDS
T06927
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
srk
Streptomyces rectiverticillatus
Pathway
srk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
srk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FGW37_27895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srk03400
]
FGW37_27895
Enzymes [BR:
srk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
FGW37_27895
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FGW37_27895
DNA repair and recombination proteins [BR:
srk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FGW37_27895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
NFACT_N
Zn_ribbon_8
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
QLE74906
LinkDB
All DBs
Position
6371145..6372008
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AA seq
287 aa
AA seq
DB search
MPELPEVEALAGFLAGRLVGRTVERVLPVAVSVLKTYDPPLTALEGREVSGVRRYGKFLD
LATGDGPHLVLHLARAGWLRWQESLPETPPRPGKGPLALRVRLTGGGGFDVTEAGTQKRL
AAYVVQDVSEVPGVARLGPDPLAPDFTLGTFADVLRDERRQLKGVLRDQSVIAGIGNAYS
DEILHAARMSPFKLAASLTEDETAALYGALRTVLHEAVERARGHAADELKAEKKSGLRVH
GRTGQPCPVCGDTVREVSFSDSSLQYCPTCQTGGKPLADRRLSRLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgccggagctgccggaggtcgaggctcttgccgggtttcttgccgggcgtctcgtgggg
cgtacggtcgagcgcgtgctgcccgtggccgtgagtgtgctgaagacctacgatccgccg
ctcaccgccctggaggggcgggaggtcagcggtgtgcgccggtacggcaagttcctcgac
ctcgccaccggcgacggcccgcacctcgtcctccatctggcccgcgccggctggctgcgc
tggcaggagagcctgcccgagacgccgccccgccccggcaagggcccgctggcgctgcgc
gtacggctgacgggcggcggcggtttcgacgtcaccgaggcgggcacccagaagcggctc
gccgcctacgtcgtacaggacgtctccgaggtgcccggcgtcgcccggctcggccccgac
cccctcgccccggacttcaccctcggcaccttcgccgacgtgctgcgcgacgagcggcgg
cagctcaagggcgtcctgcgcgaccagagcgtcatcgcgggcatcggcaacgcttactcg
gacgagatcctgcacgcggcccgcatgtccccgttcaagctcgcggcgagcctgacggag
gacgagaccgccgccctgtacggggccttgcgcaccgtgctgcacgaggccgtcgagcgg
gcgcgcggccacgccgcggacgagctgaaggcggagaagaagagcggcctgcgggtgcac
ggccgcaccgggcagccgtgccccgtgtgcggcgacaccgtccgcgaggtgtccttcagc
gactcctcgctgcagtactgccccacctgccagacgggcggcaagcccctggccgaccgc
aggctgtcccgcctgctgaaatga
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