Serratia plymuthica 4Rx13: SOD_c00140
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Entry
SOD_c00140 CDS
T02710
Symbol
malS
Name
(GenBank) alpha-amylase MalS
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl00500
Starch and sucrose metabolism
srl01100
Metabolic pathways
srl01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
SOD_c00140 (malS)
Enzymes [BR:
srl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
SOD_c00140 (malS)
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
DUF5696
Motif
Other DBs
NCBI-ProteinID:
AGO53050
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All DBs
Position
complement(15546..17612)
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AA seq
688 aa
AA seq
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MKRLTLPLLMLLSPAATASWTLQSFPTFDESTAGLFTSHATLPKGELPLKIYQDRQCWQP
TAAARLNQTLSLQPCGDAPPVTWRLFRDGEYQVRIDTRSGTPTLQLSLKTAPQAAAAAVT
RTCQRWDGKPVTLDVAATFAEGETVRDFYSGQTARVSQGKVTLQPAAGSGGMLLLESAGT
EKPAPFNWHNATVYFALTDRFENGNPTNDHSYGRRSDGMQEIGTFHGGDLAGLTQKLDYL
QQLGVNALWISSPLEQIHGWVGGGTKGDFPHYAYHGYYALDWTRLDANMGTEQDLRKLVE
QAHQRGIRILFDVVVNHVGYATLADMQTFQFGSLYLKGAEIEKTLGKNWGDWRPGPGQNW
HSFNDYINFSDKAGWSPWWGKNWIRTDIGDYDSPGYNDLTMSLAFLPDIKTEAPGASGLP
LFYRHKPDTAAHDIPGATTRDYLTTWLSQWVSDYGIDGFRVDTAKHVEKPTLALLKQRAT
AALAQWKAANPHQALDDAPFWMTGEAWGHGVMKSDYYQNGFDAMINFDFQDQASQALSCF
SSIDATYQQMADKLQDFNVLSYLSSHDTRLFFASDAKGSLPLQQRAADLLLLAPGAVQIY
YGDESGRQLGPTGSDPLQGTRSDMNWRELQDAKAPLLAHWQRLGQFRARHPAIGAGTQQS
QQTAGYYAFSRRLGDDKVMVVWVGDRSH
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcctgaccctacccctgctgatgctgctgtcaccggccgcaacagcaagctgg
acgctgcaaagcttcccgacctttgacgaatccaccgccgggctgttcaccagccacgcc
acgctgcccaagggcgaactgccgctgaaaatttatcaggatcggcaatgctggcagccg
accgctgcggccaggctgaatcaaaccctgtcgctgcaaccttgcggcgatgccccgccg
gtcacctggcggctgttccgcgacggtgaataccaggtgcgcatcgatacccgcagcggt
acgccgacgctgcaactcagcctgaaaacggccccacaggccgccgcagcagcggtaacc
cgcacctgccagcgctgggacggcaagcccgtcacccttgacgtagcggcgaccttcgcc
gaaggcgaaacagtgcgcgatttctattccggtcaaacggccagggtcagccagggcaaa
gtgacccttcagcctgccgcaggcagcggcggcatgctgctgctggaatccgccggcacg
gaaaaaccggcaccgttcaactggcacaacgccacggtctatttcgcactgaccgatcgc
tttgagaacggcaacccgaccaacgaccacagctacggccgccgcagcgacggcatgcag
gagatcggcaccttccacggcggcgatctcgccgggctgacgcaaaagctggattacctg
caacagcttggcgtcaacgcactgtggatcagctcgccgctggaacagatccacggttgg
gtcggcggcggcaccaagggcgatttcccgcactacgcttatcacggctactacgcactg
gactggacccggctcgacgccaatatgggcaccgagcaagacctgcgcaaactggtcgaa
caggcgcaccaacgcggtatccgcattctgttcgacgtggtggtaaaccatgtcggctac
gccaccttggccgatatgcagaccttccaattcggctcgctctacctgaagggcgcggag
atcgaaaaaacgctgggtaaaaactggggcgactggcggcctggtccaggccaaaactgg
cacagcttcaacgattacattaatttcagcgacaaggcgggttggagcccgtggtgggga
aaaaactggatccgcaccgatatcggcgactatgactcgccgggttataacgacctcacc
atgtcattggccttcctcccggacatcaaaactgaagcgcccggcgccagtggcctgccg
ctgttctatcgccacaaacccgacaccgccgcgcacgacattcccggcgctaccacccgc
gactacctgaccacctggctcagccaatgggtaagcgattacggtatcgacggcttccgc
gtcgataccgccaagcacgtggagaaacccacgctggcgctgctgaaacagcgtgccacg
gcggcactggcgcaatggaaagccgccaatccacaccaggcgctggatgacgccccgttc
tggatgaccggcgaagcctggggccacggcgtcatgaaaagcgactattaccagaacggc
ttcgacgcgatgatcaatttcgattttcaggatcaggcttcgcaggcgctgagctgtttc
tccagtatcgatgccacttaccagcaaatggccgacaagctgcaggatttcaacgtactg
agctatctctcctcgcacgatacccggctgttcttcgccagcgatgccaaaggttcgctg
ccattgcagcagcgtgcggcagatttgctgctgctggcccctggggcggtgcaaatttac
tacggtgatgaaagcggccgccagctcggcccgaccggttcggatccgctgcagggcacg
cgttccgatatgaactggcgtgaactgcaagacgccaaagcgccactgttggcgcattgg
cagcggcttgggcagttccgcgcccgccatccggcgatcggcgccggcacgcaacagtcg
cagcaaaccgcaggctactatgccttcagccgccgacttggcgacgacaaggtgatggtg
gtgtgggtcggcgatcggtcacattaa
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