Serratia plymuthica 4Rx13: SOD_c01210
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Entry
SOD_c01210 CDS
T02710
Symbol
rffG
Name
(GenBank) dTDp-glucose 4,6-dehydratase 2
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl00521
Streptomycin biosynthesis
srl00523
Polyketide sugar unit biosynthesis
srl00525
Acarbose and validamycin biosynthesis
srl00541
Biosynthesis of various nucleotide sugars
srl01100
Metabolic pathways
srl01110
Biosynthesis of secondary metabolites
srl01250
Biosynthesis of nucleotide sugars
Module
srl_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
srl_M01025
dTDP-D-Fuc4NAc biosynthesis, Glc-1P => dTDP-D-Fuc4NAc
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SOD_c01210 (rffG)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SOD_c01210 (rffG)
01055 Biosynthesis of vancomycin group antibiotics
SOD_c01210 (rffG)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SOD_c01210 (rffG)
00525 Acarbose and validamycin biosynthesis
SOD_c01210 (rffG)
Enzymes [BR:
srl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
SOD_c01210 (rffG)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
adh_short
Sacchrp_dh_NADP
KR
NmrA
Motif
Other DBs
NCBI-ProteinID:
AGO53155
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Position
146555..147628
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AA seq
357 aa
AA seq
DB search
MALKRILVTGGAGFIGSAVVRHIIEATQDSVMVVDKLTYAGNLESLSVIADNERYSFEQV
DICDRTALDRVFAQYQPDVIMHLAAESHVDRSIDGPAAFIETNVVGTYTMLEAARHYWHP
LDAERKQNFRFHHISTDEVYGDLHGTDDLFTETTPYSPSSPYSASKASSDHLVRAWLRTY
GLPTIVTNCSNNYGPYHFPEKLIPLVILNAVAGKPLPVYGDGAQVRDWLYVEDHARALYQ
VVTEGVVGETYNIGGHNERKNIEVVHTICDLLEELAPNKPQGIEKYRDLITYVKDRPGHD
MRYAIDAGKIDRELGWRPQETFESGIRKTVSWYLNNETWWRRVQDGSYTGERLGLSD
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgaagcgtattttagtcactggaggcgctggttttattggctccgcggtcgtg
agacatatcattgaagccacacaggacagcgtcatggtggtggataaactcacttatgcg
ggcaatctggagtcgctttcggtgattgccgataacgaacgctactcgtttgaacaggtg
gatatctgcgatcgcacggcgttggatcgggtgtttgcccagtatcagccggatgtgatc
atgcacctggcggcggaaagccatgttgaccgttcgatcgacggcccggcggcatttatt
gaaaccaacgtggtggggacctacaccatgctggaggcggctcgccattattggcatccg
ctggatgcggagagaaagcagaatttccgtttccaccacatttccaccgacgaagtgtat
ggcgacctgcacggtacggacgatctgttcactgaaaccacgccttactcgccaagcagc
ccatattcggcttctaaagcctccagcgatcatctggtgcgcgcctggttgcgcacctac
ggcctgccgaccatcgtcaccaactgttccaataactacggtccgtatcacttcccggag
aagctgatcccgctggtgatcctcaatgccgttgccggcaagccattaccggtgtacggc
gacggtgcgcaggtgcgtgactggctgtatgttgaagaccacgcgcgcgcgttgtaccag
gttgttaccgaaggcgtggtaggtgaaacctacaatatcggcggccacaacgagcgcaaa
aatatcgaggtggtgcacaccatctgcgatttgctggaagaactggcaccgaacaagccg
cagggcattgagaaataccgcgacctgattacttacgtcaaggatcgcccaggccatgat
atgcgttatgcgatagatgccggaaaaattgaccgggaactgggttggcgtccgcaggag
acctttgaaagcggtatccgcaaaacggtttcctggtatctgaacaacgaaacctggtgg
cgtcgtgttcaggacggttcctatacgggtgagcgtttaggtttatccgactaa
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