Serratia plymuthica 4Rx13: SOD_c01240
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Entry
SOD_c01240 CDS
T02710
Symbol
rffA
Name
(GenBank) lipopolysaccharide biosynthesis protein RffA
KO
K02805
dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:
2.6.1.59
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl00541
Biosynthesis of various nucleotide sugars
srl01100
Metabolic pathways
srl01250
Biosynthesis of nucleotide sugars
Module
srl_M01025
dTDP-D-Fuc4NAc biosynthesis, Glc-1P => dTDP-D-Fuc4NAc
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SOD_c01240 (rffA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
srl01007
]
SOD_c01240 (rffA)
Enzymes [BR:
srl01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.59 dTDP-4-amino-4,6-dideoxygalactose transaminase
SOD_c01240 (rffA)
Amino acid related enzymes [BR:
srl01007
]
Aminotransferase (transaminase)
Others
SOD_c01240 (rffA)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
DegT_DnrJ_EryC1
Aminotran_1_2
Aminotran_5
Beta_elim_lyase
OKR_DC_1
Cys_Met_Meta_PP
Androglobin_V
Motif
Other DBs
NCBI-ProteinID:
AGO53158
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Position
149249..150379
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AA seq
376 aa
AA seq
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MIPFNAPPVVGTELEYMQAAMGSGKLCGDGGFTRRCQQWMEQRFDSPKVLLTPSCTASLE
MAAILLDIQPGDEVIMPSFTFVSTANAFVLRGAKVVFVDLRPDTMNIDESKIEAAITDKT
RAIVPVHYAGVACEMDTIMALAKKYNLYVVEDAAQGVMATYKGKALGTIGHIGCFSFHET
KNYTAGGEGGATLINDPALIDRAEVIREKGTNRSQFFRGQVDKYTWRDIGSSYLMSDLQA
AYLWGQLEAADRINQRRLALWQKYYDSFLPLAKAGRIVLPTIPAGCVQNAHMFYIKLRDI
EDRTAFIDYLKEAEIMAVFHYIPLHDCPAGDRFGRFAGEDRFTSQESARLVRLPLFYNMS
DVNQRTVINTILSFFA
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgattccatttaacgcaccaccggttgttggtaccgaacttgagtatatgcaggctgca
atgggcagtggcaaactgtgtggcgatggcgggtttacccgtcgttgccagcagtggatg
gaacagcgttttgacagcccgaaggtattgctgacaccgtcctgtaccgcctcgctggag
atggcggcgatcctgctggatattcagccgggcgatgaagtgatcatgccgagcttcacc
tttgtttcgaccgccaacgccttcgtgctgcgcggcgctaaagtggtatttgtcgacctg
cgcccggacaccatgaatatcgatgagagcaaaatcgaagcggcgatcaccgataagacc
cgcgccattgtgccggttcattacgccggcgtagcctgcgagatggacaccatcatggcg
ctggcgaaaaaatacaatttgtacgtggtcgaagatgccgcacagggtgtgatggccact
tataagggcaaagcgctcggcaccatcggccatattggttgtttcagcttccacgaaacc
aaaaactacaccgcaggcggtgagggtggcgccacgctgattaacgatccggcgctgatc
gaccgggcggaagtcattcgcgagaaaggcaccaaccgtagccagttcttccgtgggcag
gtcgacaagtacacctggcgcgatatcggctccagctatctgatgtcagatctgcaggcc
gcttacctgtggggccagctcgaggcggccgatcgcatcaaccagcgccgcctggcgcta
tggcagaagtattacgatagcttcctgccgctggctaaggccggccgcatcgtcttgccg
accattccggcgggctgcgtgcagaatgcgcacatgttctatatcaaactgcgtgatatt
gaagatcgcacggcgtttatcgattatctgaaagaagccgaaatcatggcggtgttccat
tacattccgctgcatgactgcccggcgggcgatcgtttcggccgctttgccggtgaagac
cgcttcaccagccaggaaagcgcgcgtctggtgcgcctgcctctgttctataatatgtct
gacgttaatcagcgtacggtgatcaataccattcttagtttcttcgcctga
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