KEGG   Serratia plymuthica 4Rx13: SOD_c01410
Entry
SOD_c01410        CDS       T02710                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase DapF
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
srl  Serratia plymuthica 4Rx13
Pathway
srl00300  Lysine biosynthesis
srl00470  D-Amino acid metabolism
srl01100  Metabolic pathways
srl01110  Biosynthesis of secondary metabolites
srl01120  Microbial metabolism in diverse environments
srl01230  Biosynthesis of amino acids
Module
srl_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:srl00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    SOD_c01410 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    SOD_c01410 (dapF)
Enzymes [BR:srl01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     SOD_c01410 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF CntK_N
Other DBs
NCBI-ProteinID: AGO53171
LinkDB
Position
165650..166474
AA seq 274 aa
MQFSKMHGLGNDFMVVDAVTQNVYFSPELIRRLADRHLGVGFDQMLVVEPPYDPELDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTQTGRMVLSVTDDDLVCVNMGE
PNFDPQAVPFRATKEERTYIMRAAEHTVLCGVVSMGNPHCVLQVDDVKTAKVELLGPVLE
GHERFPERANIGFMQIVSREHIKLRVYERGAGETQACGSGACAAVAVGIQQELLSEEVHV
ELPGGSLHIRWKGPGNPLFMTGPATHVYDGFIHL
NT seq 825 nt   +upstreamnt  +downstreamnt
atgcagttctccaaaatgcacggtctgggcaacgactttatggtggtcgatgccgttaca
cagaatgtctatttttcacctgaactgatccgccgattggccgatcggcacttgggcgtt
ggctttgaccagatgctggtggtagaaccgccttacgatccggaacttgatttccactat
cgcattttcaacgccgacggcagtgaagtggcgcagtgcggtaacggcgcccgctgtttc
gcccgctttgtgcggctgaaagggttgaccaacaaacgcgacatccgcgtcagcacccaa
accggacgcatggtgctcagcgtcaccgacgacgatctggtgtgcgtgaatatgggcgaa
ccgaattttgatcctcaggctgtgccgtttcgcgccaccaaagaggaaaggacatacatc
atgcgtgcggcggaacatacggtgctgtgcggcgtggtgtcgatgggcaatccgcattgt
gttttacaggtggatgatgtaaaaaccgccaaggtagagctgcttgggccggtgctggaa
ggacacgagcgcttcccggaacgggccaatatcggttttatgcaaatcgtcagtcgtgaa
catatcaagctgcgggtctatgagcgcggcgccggtgaaacgcaggcctgcggcagcggc
gcttgtgcggcagtggcagtagggattcaacaagaattgctgtcagaagaggtgcatgta
gaactgccgggcggcagcctgcatattcgctggaaagggccgggcaatccgctgtttatg
accggtccggcaacccatgtatatgacggatttattcatctatga

DBGET integrated database retrieval system