Serratia plymuthica 4Rx13: SOD_c01410
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Entry
SOD_c01410 CDS
T02710
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase DapF
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl00300
Lysine biosynthesis
srl00470
D-Amino acid metabolism
srl01100
Metabolic pathways
srl01110
Biosynthesis of secondary metabolites
srl01120
Microbial metabolism in diverse environments
srl01230
Biosynthesis of amino acids
Module
srl_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SOD_c01410 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SOD_c01410 (dapF)
Enzymes [BR:
srl01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
SOD_c01410 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
Motif
Other DBs
NCBI-ProteinID:
AGO53171
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Position
165650..166474
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVYFSPELIRRLADRHLGVGFDQMLVVEPPYDPELDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTQTGRMVLSVTDDDLVCVNMGE
PNFDPQAVPFRATKEERTYIMRAAEHTVLCGVVSMGNPHCVLQVDDVKTAKVELLGPVLE
GHERFPERANIGFMQIVSREHIKLRVYERGAGETQACGSGACAAVAVGIQQELLSEEVHV
ELPGGSLHIRWKGPGNPLFMTGPATHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctccaaaatgcacggtctgggcaacgactttatggtggtcgatgccgttaca
cagaatgtctatttttcacctgaactgatccgccgattggccgatcggcacttgggcgtt
ggctttgaccagatgctggtggtagaaccgccttacgatccggaacttgatttccactat
cgcattttcaacgccgacggcagtgaagtggcgcagtgcggtaacggcgcccgctgtttc
gcccgctttgtgcggctgaaagggttgaccaacaaacgcgacatccgcgtcagcacccaa
accggacgcatggtgctcagcgtcaccgacgacgatctggtgtgcgtgaatatgggcgaa
ccgaattttgatcctcaggctgtgccgtttcgcgccaccaaagaggaaaggacatacatc
atgcgtgcggcggaacatacggtgctgtgcggcgtggtgtcgatgggcaatccgcattgt
gttttacaggtggatgatgtaaaaaccgccaaggtagagctgcttgggccggtgctggaa
ggacacgagcgcttcccggaacgggccaatatcggttttatgcaaatcgtcagtcgtgaa
catatcaagctgcgggtctatgagcgcggcgccggtgaaacgcaggcctgcggcagcggc
gcttgtgcggcagtggcagtagggattcaacaagaattgctgtcagaagaggtgcatgta
gaactgccgggcggcagcctgcatattcgctggaaagggccgggcaatccgctgtttatg
accggtccggcaacccatgtatatgacggatttattcatctatga
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