Serratia plymuthica 4Rx13: SOD_c02060
Help
Entry
SOD_c02060 CDS
T02710
Symbol
hemB
Name
(GenBank) delta-aminolevulinic acid dehydratase HemB
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl00860
Porphyrin metabolism
srl01100
Metabolic pathways
srl01110
Biosynthesis of secondary metabolites
srl01120
Microbial metabolism in diverse environments
srl01240
Biosynthesis of cofactors
Module
srl_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
srl_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
SOD_c02060 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
srl04147
]
SOD_c02060 (hemB)
Enzymes [BR:
srl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
SOD_c02060 (hemB)
Exosome [BR:
srl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SOD_c02060 (hemB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
AGO53236
LinkDB
All DBs
Position
234924..235946
Genome browser
AA seq
340 aa
AA seq
DB search
MSYAFPGAFPGRRMRRVRRHDFSRRLVAENQLTVNDLIYPVFVMEGSNRQEAVASMPGVS
RMSIDLLIKEAEAIAKLGVPVISLFPVIEPGLKSLHAEEAYNPDGLVQRTVRALKDAVPE
LGVLTDVALDPYTTHGQDGVIDEHGYVINDISKDILVRQALSHAEAGAEIVAPSDMMDGR
IGAIRDRLEHQGLINTQIMAYSAKYASCYYGPFRDALGSSGNLKGGNKKTYQMDPANSDE
ALQEIAQDLQEGADMVMVKPGMPYLDVVRRVKDTFGVPTFAYQVSGEYAMHMAAIQNGWL
QEQPAVMESLMCFKRAGADGVLTYFAKRVAQWLHDEAMQR
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgcatttccgggcgcctttccaggccgccgtatgcgccgtgtgcgccgtcat
gatttcagccgtcgtctggtggcggagaatcaactgacggttaacgacctgatttatccg
gtatttgtcatggaaggcagtaaccgtcaggaagcggtagcatccatgcccggcgtatcg
cgcatgagcatcgatttgttgattaaggaagcggaagccatcgccaagcttggcgtgccg
gtgatctccctgttcccggtgattgaacctggtctgaagtcattgcatgcggaagaggct
tataatccggacggtttggtgcagcgtacggttcgtgcgttgaaagacgcggtgccagag
ctgggtgttctgactgacgtggcgctggatccgtacaccactcacggccaggatggcgtg
attgatgagcacggctacgtcattaacgatatcagcaaagatattctggtgcgtcaggcg
ttatcccatgcggaagccggagcggaaatcgtggcgccgagcgatatgatggacggccgt
atcggcgcgatccgcgatcgtctggagcatcaggggctgattaatacccagatcatggcg
tactccgccaaatatgcctcctgctactatggcccgttccgcgatgcgctcggttccagc
ggcaatctgaaaggcggcaacaagaaaacctatcagatggaccctgccaacagtgacgaa
gcgctgcaggaaattgcgcaagatctccaggaaggcgcggatatggtgatggtgaaaccc
ggtatgccttatctcgatgtggtgcgtcgggtgaaagacacctttggcgtgccgaccttt
gcctatcaggtttctggtgaatatgcgatgcacatggcggcgattcagaacggttggttg
caggagcaaccggcggtgatggagtcgctgatgtgctttaagcgcgccggggccgatggc
gtgctgacctacttcgccaaacgggtagcccagtggctgcacgatgaagcgatgcagcgc
taa
DBGET
integrated database retrieval system
