Serratia plymuthica 4Rx13: SOD_c02800
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Entry
SOD_c02800 CDS
T02710
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SOD_c02800 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srl03019
]
SOD_c02800 (groL)
03110 Chaperones and folding catalysts [BR:
srl03110
]
SOD_c02800 (groL)
03029 Mitochondrial biogenesis [BR:
srl03029
]
SOD_c02800 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
srl04147
]
SOD_c02800 (groL)
Enzymes [BR:
srl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SOD_c02800 (groL)
Messenger RNA biogenesis [BR:
srl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SOD_c02800 (groL)
Chaperones and folding catalysts [BR:
srl03110
]
Heat shock proteins
HSP60 / Chaperonin
SOD_c02800 (groL)
Mitochondrial biogenesis [BR:
srl03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SOD_c02800 (groL)
Exosome [BR:
srl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SOD_c02800 (groL)
Exosomal proteins of other body fluids (saliva and urine)
SOD_c02800 (groL)
Exosomal proteins of breast cancer cells
SOD_c02800 (groL)
Exosomal proteins of colorectal cancer cells
SOD_c02800 (groL)
Exosomal proteins of bladder cancer cells
SOD_c02800 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AGO53296
LinkDB
All DBs
Position
314598..316244
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIITEGLKAVAAGMNPMDLKRGI
DKAVIAAVEELKKLSVPCSDSKAIAQVGTISANSDETVGKLIAEAMEKVGKEGVITVEEG
TGLQDELDVVEGMQFDRGYLSPYFINKPETGSIELESPFILLADKKISNIREMLPVLEAV
AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV
ISEEIGLELEKATLEDLGTAKRIVINKDTTIIIDGNGEEPAIQGRVSQIRQQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI
RAASKLSDLRGVNEDQNVGIKVALRAMESPLRQIVLNCGEEPSVVANTVKAGEGNYGYNA
ATEEYGDMIAMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKSDAPDLGGAGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaattcggcaacgacgctcgcgtgaaaatgctccgcggcgtg
aatgttctcgctgatgcagtaaaagtgaccctgggcccgaaaggccgtaacgtagtgctg
gataaatccttcggcgctcctaccatcactaaagatggcgtatccgttgcccgtgaaatc
gaactggaagacaagtttgaaaacatgggtgcgcagatggtgaaagaagtggcctccaaa
gcgaacgacgctgcgggcgacggcaccaccactgcaaccgtactggctcaatccatcatc
accgaaggcctgaaagcagtagctgccggcatgaacccgatggatctgaagcgcggtatc
gacaaagcggttatcgccgctgttgaagagctgaaaaaactgtccgtaccttgctctgac
tccaaagctatcgctcaggtaggcaccatctctgcaaactccgacgaaaccgtgggtaaa
ctgattgcagaagccatggagaaagtgggcaaagaaggcgttatcaccgttgaagaaggc
actggcctgcaagacgagctggacgtcgttgaaggtatgcagttcgaccgcggctacctg
tctccttacttcatcaacaagccggaaaccggttctatcgagctggaaagcccgttcatc
ctgctggctgacaagaaaatctccaacatccgtgaaatgctgccagtactggaagccgtg
gcgaaagccggcaagccattgctgatcatcgctgaagatgttgaaggcgaagcactggct
accctggtggtcaacaccatgcgcggcatcgtgaaagtggctgcggttaaagcacctggt
ttcggcgaccgtcgtaaagccatgctgcaggatatcgctaccctgactggcggtaccgtt
atctctgaagagattggtctggagctggaaaaagcgactctggaagacctgggtacggct
aaacgcatcgttatcaacaaagacaccactatcatcatcgatggcaatggtgaagaacct
gcgatccagggccgcgtgtcccagattcgtcagcagatcgaagaagcaacttctgattac
gaccgtgaaaaactgcaagagcgcgtagctaaactggctggcggcgttgcggtaatcaaa
gtcggcgctgctaccgaagttgaaatgaaagagaagaaagctcgcgttgaagatgctctg
cacgcaacccgtgcagcggtagaagaaggcgtagttgctggtggtggtgttgcgctgatt
cgcgctgcgtccaaactgagcgatctgcgtggcgtgaacgaagatcagaacgtgggtatc
aaagttgcgctgcgcgcaatggaatcaccactgcgtcagatcgttctgaactgcggcgaa
gagccttctgttgttgccaacaccgtgaaagcgggcgaaggtaactacggttacaacgca
gcaactgaagaatacggcgacatgatcgcgatgggtatcctggatccaaccaaagtaacc
cgttctgctctgcagtacgcggcttctgtggctggcctgatgatcaccaccgagtgcatg
gtgaccgacctgccgaaaagcgatgcgcctgatttaggcggcgctggcggtatgggcggc
atgggtggcatgggcggcatgatgtaa
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