Serratia plymuthica 4Rx13: SOD_c02880
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Entry
SOD_c02880 CDS
T02710
Symbol
frdB
Name
(GenBank) fumarate reductase iron-sulfur subunit FrdB
KO
K00245
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl00020
Citrate cycle (TCA cycle)
srl00190
Oxidative phosphorylation
srl00620
Pyruvate metabolism
srl00650
Butanoate metabolism
srl00720
Other carbon fixation pathways
srl01100
Metabolic pathways
srl01110
Biosynthesis of secondary metabolites
srl01120
Microbial metabolism in diverse environments
srl01200
Carbon metabolism
srl02020
Two-component system
Module
srl_M00009
Citrate cycle (TCA cycle, Krebs cycle)
srl_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
srl_M00150
Fumarate reductase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SOD_c02880 (frdB)
00620 Pyruvate metabolism
SOD_c02880 (frdB)
00650 Butanoate metabolism
SOD_c02880 (frdB)
09102 Energy metabolism
00190 Oxidative phosphorylation
SOD_c02880 (frdB)
00720 Other carbon fixation pathways
SOD_c02880 (frdB)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SOD_c02880 (frdB)
Enzymes [BR:
srl01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
SOD_c02880 (frdB)
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_10
Fer4_8
Fer4_17
Fer4_9
Fer4_7
Fer4_18
Fer4_16
Fer4
Fer4_2
Fer4_4
Fer4_21
Fer2
Fer4_6
Fer4_3
Fer4_13
Motif
Other DBs
NCBI-ProteinID:
AGO53304
LinkDB
All DBs
Position
complement(320923..321657)
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AA seq
244 aa
AA seq
DB search
MAEMNTLKIEVMRYNPERDAEPHFETFAVPYDEQTSLLDALGYIKDNLAPDLSYRWSCRM
AICGSCGMMVNRVPKLACKTFLREYTGGMKVEALGNFPIERDLVVDMTHFIESLEAIKPY
IIGNNRKPEDGPNVQTPAQMAKYHQFSGCINCGLCYAACPQFGLNPEFIGPAAITLAHRY
NLDNRDHGKKQRMAQLNGQNGVWSCTFVGYCSEVCPKHVDPAAAIQQGKVESAKDFMIAM
LKPQ
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggctgagatgaacaccctgaaaatcgaggtcatgcgctataacccggaacgcgacgcc
gagccgcatttcgagacctttgcagtgccttatgacgaacaaacctcgctgctcgatgcg
ctgggctacatcaaagataacctggcgcccgatctttcctaccgctggtcatgccgcatg
gcgatctgcggctcgtgcggcatgatggttaaccgggtgccgaaactggcctgcaaaacc
ttcctgcgcgaatacaccggcggcatgaaggtggaagcgctgggcaacttcccgatcgag
cgcgatttggtggtcgatatgacccactttatcgaaagcctggaggcgattaagccctat
atcatcggcaacaaccgcaagccggaagatggccctaatgtgcaaaccccggcgcaaatg
gccaaatatcaccagttttccggctgcatcaactgcggtctatgctatgccgcctgtccg
cagttcggtctgaacccggaatttatcggcccggcggcgatcaccctggcgcaccgctat
aacctggataaccgcgatcatggcaagaagcagcgcatggcgcagcttaacggccagaac
ggcgtctggagctgtacctttgtcggttactgctctgaagtgtgtccaaagcacgtcgac
ccggccgctgccatccagcagggcaaggtggaaagcgccaaagacttcatgatcgccatg
ctgaagccgcaataa
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