Serratia plymuthica 4Rx13: SOD_c03460
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Entry
SOD_c03460 CDS
T02710
Symbol
ispB
Name
(GenBank) octaprenyl-diphosphate synthase IspB
KO
K02523
octaprenyl-diphosphate synthase [EC:
2.5.1.90
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl00900
Terpenoid backbone biosynthesis
srl01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SOD_c03460 (ispB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
srl01006
]
SOD_c03460 (ispB)
Enzymes [BR:
srl01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.90 all-trans-octaprenyl-diphosphate synthase
SOD_c03460 (ispB)
Prenyltransferases [BR:
srl01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
SOD_c03460 (ispB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
MCM5_C
HEPPP_synt_1
Motif
Other DBs
NCBI-ProteinID:
AGO53359
LinkDB
All DBs
Position
complement(379882..380814)
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AA seq
310 aa
AA seq
DB search
MAAVNATILEQLNSDVTLINQLGYYIISGGGKRIRPMIAVLAARALHYQGDKHITVAALI
EFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQMMTSLESLRVLA
LMSEAVNVIAEGEVLQLMNVNDPDITEESYMRVIYSKTARLFEAAAQSSAILSEASEAEE
KALQDYGRYLGTAFQLIDDLLDYSADGSTLGKNTGDDLNEGKPTLPLLHAMRNGNSAQTA
MIREAIEQGSGRHLLEPVLQAMQQCGSLEYTRQRAEEEADKAIAALQVLPESPHRSALEG
LAHLAVQRDF
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtgaacgcaacaattctcgaacagctgaattccgatgtcacactcatcaat
cagcttggctattacattatcagcggtggcggtaaacgcatccgcccgatgatcgccgtt
ctggcggcgcgggcattgcattatcaaggtgataagcacattaccgtcgctgcgctgatc
gaattcattcataccgctaccctgttgcatgatgacgtggtggatgaatccgacatgcga
cgcggcaaggctaccgccaatgccgcgttcggcaatgctgccagcgtgctggtgggcgac
ttcatttatacccgcgctttccagatgatgaccagcctggagtcactccgcgtgctggcg
ctgatgtccgaagcggtcaacgtcattgctgaaggtgaagtgctgcagttaatgaacgtg
aacgatccggacatcaccgaagaaagctatatgcgggtaatctacagcaaaaccgctcgt
ctgtttgaagcggcggcgcaatcgtcggcgatcctttcagaggccagcgaagcagaagaa
aaagcgctgcaggattacggccgttatctcggcaccgctttccagttgatcgacgatctg
ctcgattacagcgccgacggcagcaccctgggtaaaaataccggtgacgatctgaacgaa
gggaagcccacactgcccttgctgcacgccatgcgtaacggcaacagcgcgcaaacggcc
atgatccgcgaagccattgagcaaggcagcggccgtcatctgctggaacctgttttacag
gccatgcaacagtgcggttcgcttgaatatacccgccaacgcgccgaagaagaagccgat
aaggcgattgccgcgctgcaggttctgccggaatcccctcatcgctccgcattggaagga
ttagcgcaccttgcggttcagcgagatttttga
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