Serratia plymuthica 4Rx13: SOD_c03560
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Entry
SOD_c03560 CDS
T02710
Symbol
rlmE
Name
(GenBank) ribosomal RNA large subunit methyltransferase E
KO
K02427
23S rRNA (uridine2552-2'-O)-methyltransferase [EC:
2.1.1.166
]
Organism
srl
Serratia plymuthica 4Rx13
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
srl03009
]
SOD_c03560 (rlmE)
Enzymes [BR:
srl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.166 23S rRNA (uridine2552-2'-O)-methyltransferase
SOD_c03560 (rlmE)
Ribosome biogenesis [BR:
srl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SOD_c03560 (rlmE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
Methyltransf_31
Reovirus_L2_MT1
Methyltr_RsmB-F
Motif
Other DBs
NCBI-ProteinID:
AGO53369
LinkDB
All DBs
Position
388477..389106
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AA seq
209 aa
AA seq
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MANKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQSDKLFKPGMTVVDLGA
APGGWSQYVVTQIGGNGRIIACDILPMDPIVGVDFLQGDFRDELVLKALLERVGESKVQV
VMSDMAPNMSGTPAVDIPRSMYLVELALGMCRDVLAPGGSFLVKVFQGDGFDEYLREIRS
LFTKVKIRKPDASRARSREVYIVATGRKL
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggctaataaaaagcgttctgctagctccagtcgctggttacaagaacactttagcgat
aaatatgtgcaacaggcgcagaaaaaagggctgcgttcgcgcgcctggtttaaacttgat
gaaatacagcaaagtgacaagctatttaaacccggcatgaccgtagtggatttaggcgca
gcgccgggcggttggtcgcagtatgtagtaacgcagatcggcggtaacggtcgtatcatc
gcctgtgatattttgccaatggatcctatcgttggtgtcgatttccttcagggcgatttt
cgtgatgaactggtccttaaagctctgttggaacgtgtaggtgaaagtaaggttcaggtg
gttatgtctgacatggccccgaatatgagtggcactccggccgtcgatattccaagatcg
atgtatctggtggaattagcactgggaatgtgtcgtgatgtcctcgcgccaggcggaagt
ttcctggtgaaggtgttccagggagatggctttgacgagtacctacgggaaattcgctcc
ctgtttacgaaggttaagattcgtaagccagacgcttcccgcgcacgttcgcgcgaagtg
tacattgtagcgacagggcgcaagctgtag
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