Serratia plymuthica 4Rx13: SOD_c03670
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Entry
SOD_c03670 CDS
T02710
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
srl
Serratia plymuthica 4Rx13
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
srl03016
]
SOD_c03670 (truB)
Enzymes [BR:
srl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SOD_c03670 (truB)
Transfer RNA biogenesis [BR:
srl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SOD_c03670 (truB)
Prokaryotic type
SOD_c03670 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AGO53378
LinkDB
All DBs
Position
399642..400586
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDIHGVLLLDKPQGLSSNDALQKVKRLYNANRAGHTGALDPLATGMLPICLG
EATKFSQFLLDSDKRYRVIAKLGQRTDTSDADGQIVQERPVNFTQAQLDAALDSFRGDIK
QVPSMYSALKYQGKKLYEYARQGIEVPREARSITVYELQFIRWEGDELELEIHCSKGTYI
RTITDDLGELLGCGAHVIYLRRLQVATYPIERMVTLEQLNALLEQAQAQEIAPGELLDPL
LMPMDSPVENYPEVNLLPVVAGYVKQGQPVQVAGAPASGMVRMTEGEERKFIGVGDIADD
GRVAPRRLVVEHFD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgccctcgtcgccgcggccgtgatattcacggcgtactgttgctggacaaaccg
cagggtctgtcgtccaacgacgctctgcaaaaagtgaaacgcctttataacgccaatcgc
gcgggccacaccggcgcgctcgatccgctggcgaccggcatgctgccgatttgcctgggt
gaggcgaccaagttctcgcaattcctgctcgactccgataaacgctatcgtgtcattgcc
aagctgggtcagcgtaccgatacctcggatgcggacggccagattgtgcaagagcgcccg
gtgaatttcactcaggctcaactcgatgcggcgctggacagcttccgcggcgatatcaag
caagtgccgtcgatgtactcggcgctgaagtaccagggcaagaaactctacgagtatgcg
cgccagggtatcgaagtgccgcgtgaagcgcgcagcatcacggtttatgaactgcagttc
attcgctgggaaggcgacgagctggagttggaaatccactgttcgaaaggcacctacatc
cgcaccatcaccgatgatctcggtgaactgctgggctgcggcgcgcacgtgatctatctg
cgtcgtttgcaggtagcgacttatccgatcgaacgcatggtcacgcttgagcagttgaac
gcgttgctggagcaagcccaggcgcaggaaatcgcgcctggcgagttgctcgatccgttg
ctgatgccgatggacagcccggtagaaaactacccggaagtgaatttgctgccggtcgtt
gcgggttacgtcaagcaggggcagccggtacaggttgccggcgcaccggcttcgggcatg
gtgcgaatgaccgaaggtgaagagcgtaaatttatcggcgtaggtgacatcgccgatgac
ggtcgcgtagcgccgcgccgcctggtggtcgaacatttcgactga
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