Serratia plymuthica 4Rx13: SOD_c04060
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Entry
SOD_c04060 CDS
T02710
Symbol
nrdD
Name
(GenBank) anaerobic ribonucleoside-triphosphate reductase NrdD
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl00230
Purine metabolism
srl00240
Pyrimidine metabolism
srl01100
Metabolic pathways
srl01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
SOD_c04060 (nrdD)
00240 Pyrimidine metabolism
SOD_c04060 (nrdD)
Enzymes [BR:
srl01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
SOD_c04060 (nrdD)
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Motif
Pfam:
NRDD
Gly_radical
ATP-cone
Zn_ribbon_TiaS
Zn_Tnp_IS91
DUF7129
Motif
Other DBs
NCBI-ProteinID:
AGO53417
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Position
complement(437274..439412)
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AA seq
712 aa
AA seq
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MKPVVIKRDGCQVSFDEARIGQAIERAALAVGVVDADYCATVARVVAQQMAQQPRVDIHD
IQQAVENQLMAGEYKQLARAYIEYRHDRDVARELRGRLNQEIRGLVEQSNMALLNENANK
DSKVIPTQRDLLAGIVAKHYAKQHILPRDVVLAHERGEIHYHDLDYSPFFPMFNCMLIDL
KGMLTNGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEILAPFVSESF
EKHRQVAEQWKIPDAQGYAMARTEKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTC
WESRLIQRSILKNRIAGLGKNRKTAVFPKLVFAIRDGLNHQYGDPNYDIKQLALECASKR
MYPDILNYDQVVKVTGSFKTPMGCRSFLGTYEEDGELVHDGRNNIGVISLNLPRIALEAA
GDETRFWRLLDQRLLLAKKALMTRIARLEGIKARVAPILYMEGACGVRLKADDNIADIFK
NGRASISLGYIGLHETINALFGNGTHVYDNAALRAKAVAIVERLRTATDSWKEETGYGFS
LYSTPSENLCDRFCRLDTADFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKLDFEAPYPPL
ANGGFICYGEYPNLQHNLKALEDVWDYSYSRVPYYGTNTPIDECYECGFTGEFACTSKGF
TCPKCGNHEPSKVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQLG
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaccagtagtgattaaacgggacggttgtcaggtctcttttgacgaggcacgtatt
gggcaggctattgaacgggccgcgctggccgtcggggttgtcgatgccgattactgcgca
accgtggcccgcgtggtcgctcaacagatggcgcaacagcctcgcgtggatatccatgac
attcagcaggcggtggaaaatcagctgatggccggcgaatacaagcagctggcgcgtgcc
tatatcgaatatcgccacgaccgcgacgtggcgcgcgagctgcgcgggcggctgaaccag
gagatccgcggtctggtcgaacaaagcaatatggccttgctgaacgagaacgccaataaa
gacagcaaggtgatccccacccagcgcgatctgctggccgggatcgtcgccaaacactac
gccaagcagcacattctgccgcgtgacgtggtgctggcgcatgaacgcggcgagatccac
taccacgacctcgactattcgccgttcttcccgatgttcaactgcatgctgatcgatctg
aaaggcatgctgaccaacggcttcaagatgggcaatgccgagatcgaaccgccgaagtcg
atctccaccgccaccgccgtgaccgcccaaattatcgcgcaggtggccagccacatttat
ggcggcaccaccattaaccgcatcgacgagatccttgcgcccttcgtcagcgaaagcttc
gaaaaacaccgccaggtggccgaacagtggaaaatcccggacgcgcagggttatgcgatg
gcgcgcaccgagaaagagtgttacgacgcctttcagtcgctggaatacgaggtcaacacc
ctgcacaccgccaacggccaaacgccgttcgtcaccttcggtttcggcctgggcacctgc
tgggaatcgcggctgattcagcgctcaatcctgaaaaaccgtattgccgggctgggcaag
aaccgcaagacggcggtattccccaaactggtgttcgccatccgcgacggcctgaaccac
cagtatggcgacccgaactacgacatcaaacagctggcgctggaatgcgccagcaagcgc
atgtacccggatattctcaattacgatcaggtggtgaaggtcaccggctcgttcaagaca
ccaatgggctgccgcagcttcctcggcacctacgaggaagatggcgaactggtgcacgac
ggccgcaataatatcggcgtgatcagcctgaacttgccgcgtatcgcgctggaagcggcc
ggcgacgagacgcgtttctggcgtctgctggaccaacggctgctgctggcgaaaaaggcg
ctgatgacgcgtatcgcacgcctggaaggcatcaaggcacgggtggccccgatcctgtat
atggaaggtgcctgcggcgtaaggctgaaggcggacgacaatatcgccgacatcttcaaa
aatggccgcgcgtcgatttcgctgggctatatcggcctgcatgaaaccatcaacgcgctg
ttcggcaacggcactcacgtttacgacaatgccgcgctgcgcgccaaagcggtcgctatc
gttgaacgcctgcgcaccgcgaccgacagttggaaagaagagaccggctacggttttagc
ctgtacagcacgccaagcgagaacctgtgcgatcgcttctgccggctggacaccgccgat
ttcggcgtggtgccgggcgttaccgacaaaggctattacaccaacagcttccatctcgac
gtggagaaaaaggtcaatccgtacgacaaactggactttgaggcgccctatccacccttg
gccaacggcggtttcatctgttacggcgaataccccaacctgcaacacaatttgaaagcg
ctggaagacgtgtgggattacagctacagccgcgtgccttattacggcaccaacacgccg
atcgacgagtgctacgagtgcggctttaccggtgaattcgcctgtaccagcaaaggcttt
acctgcccgaaatgcggcaatcacgagccgtccaaggtgtcggtcacccgccgggtgtgc
ggctacctcggcagcccggacgccaggccgttcaacgccggcaagcaggaagaggtgaaa
cgccgggtgaaacacctcggcaatgggcagctcggctga
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