Serratia plymuthica 4Rx13: SOD_c04360
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Entry
SOD_c04360 CDS
T02710
Symbol
valS
Name
(GenBank) valine--tRNA ligase ValS
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SOD_c04360 (valS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
srl01007
]
SOD_c04360 (valS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
srl03016
]
SOD_c04360 (valS)
Enzymes [BR:
srl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
SOD_c04360 (valS)
Amino acid related enzymes [BR:
srl01007
]
Aminoacyl-tRNA synthetase
Class I (U)
SOD_c04360 (valS)
Transfer RNA biogenesis [BR:
srl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SOD_c04360 (valS)
Prokaryotic type
SOD_c04360 (valS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
Val_tRNA-synt_C
tRNA-synt_1g
tRNA-synt_1_2
ABC_tran_CTD
tRNA-synt_1f
End3
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
AGO53447
LinkDB
All DBs
Position
complement(474491..477235)
Genome browser
AA seq
914 aa
AA seq
DB search
MIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQAGTDHAGIATQMVVERKIAAE
ENKTRHDYGRDAFIDKIWQWKAESGGTITRQMRRLGNSVDWERERFTMDEGLSNAVREVF
VRLHKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHLRYPLADGAKTAEGKDYL
VVATTRPETVLGDTGVAVNPEDPRYKDLIGKEIILPLVGRRIRIVGDEHADMEKGTGCVK
ITPAHDFNDYEVGKRHGLPMINILTFDGDIRQEAEVFNTLGEICTDYCNEIPAQFRGLER
FAARKAVVAAFEELGLLEEIKPHDLTVPYGDRGGVVIEPMLTDQWYVRTAPLAKVAVEAV
EQGEIQFVPKQYENMYFSWMRDIQDWCISRQLWWGHRIPAWYDVNGKVYVGRSEEEVRSE
NNLGADVVLTQDEDVLDTWFSSGLWTFSTLGWPEQTDALKTFHPTSVMVSGFDIIFFWIA
RMIMLTMHFMKDENGKPQVPFKTVYMTGLIRDDEGQKMSKSKGNVIDPLDMVDGISLEDL
LEKRTGNMMQPQLAEKIRKRTEKQFPNGIEPHGTDALRFTLAALASTGRDINWDMKRLEG
YRNFCNKLWNASRFVLMNAEGQDCGFNGGEKVLSLADRWILAEFNRTVKAYREALDTYRF
DLAANILYEFTWNQFCDWYLELTKPVVSNGSEAEQRGTRHTLITVLEALLRLAHPVIPFI
TETIWQRVKTLTGETADTIMLQPFPEYDAALEDTQALNDLEWIKQAITAVRNIRAEMNIA
PSKQLDVLLRNCNADAQRRVQENQSFIERLARLESIALLPAGDKGPLSVTKLVDGAELLI
PMAGFIDKDAEIARLSKEMGKLDAEIASIEGKLSNEGFVARAPEAVVAKERERLAACKEG
KVKLQEQQASIAAL
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgatcccgccgccgaacgtcaccggcagcctgcacatgggccacgccttccagcagacc
atcatggacaccatgatccgctaccagcgcatgcaggggaaaaacaccctgtggcaggcc
ggtaccgaccatgccggtatcgcgacccagatggtggttgagcgcaagatcgccgcagaa
gaaaacaaaacccgccatgactatggccgcgacgcgttcatcgacaaaatctggcagtgg
aaagcggaatccggcggcaccatcacccgccagatgcgccgtctgggcaactccgtcgac
tgggagcgcgagcgcttcaccatggacgaaggcctgtccaatgcggtacgcgaagtgttt
gtccgcctgcacaaagaagatctgatctaccgcggcaagcgcctggtgaactgggatccg
aaactgcgcaccgccatctccgatctggaagtggaaaaccgcgagtccaaaggctcgatg
tggcacctgcgctacccgctggccgacggcgccaaaaccgccgaaggcaaagactatctg
gtggtcgccaccacccgtccggaaaccgtgctcggtgataccggcgtggcggtgaacccg
gaagatccgcgctacaaagaccttatcggcaaagaaatcattctgccgctggtgggccgc
cgcatccgcatcgtcggcgacgaacacgccgatatggaaaaaggcaccggctgcgtgaaa
atcaccccggcgcacgactttaacgactacgaagtcggtaaacgtcacggcctgccgatg
atcaacatcctgactttcgacggcgatatccgccaggaagcggaagtgttcaacacgctc
ggcgaaatctgcaccgactactgcaacgaaattccggcccagttccgtggcctggagcgt
ttcgcggcgcgtaaagcggtggttgccgcctttgaagagcttggcctgctggaagagatc
aaaccgcacgacctgacggtgccttacggcgaccgcggcggcgtggtgatcgagccgatg
ctgaccgaccaatggtacgtgcgcactgcgccgctggcgaaagtggcggtggaagccgtt
gagcaaggcgaaattcagttcgtgccgaagcagtacgaaaacatgtacttcagttggatg
cgcgacattcaggactggtgcatctcccgtcagctgtggtggggccaccgcattccggcc
tggtacgacgtgaacggcaaagtctacgttggccgcagcgaagaagaagtgcgcagcgaa
aacaacctgggcgccgacgtggtgctgacgcaagacgaagacgtgctggacacctggttc
tcttccggcctgtggaccttctctaccctgggctggccagagcagaccgacgcgctgaaa
accttccacccgaccagcgtgatggtcagcggcttcgacatcatcttcttctggattgcg
cgcatgatcatgctgaccatgcacttcatgaaggacgaaaacggcaagccgcaagttccg
ttcaagacggtctacatgaccggcctgatccgcgacgacgaagggcagaagatgtccaag
tcgaaaggcaacgtcatcgatccactggacatggtcgacggcatctcgctggaagacctg
ctggaaaaacgcaccggcaacatgatgcagccgcagctggcggaaaaaatccgcaagcgc
accgagaagcagttcccgaacggtatcgaaccgcacggcaccgacgccctgcgcttcacc
ctggcggcgctggcctctaccggccgtgacatcaactgggacatgaagcgcctggaaggc
taccgcaacttctgtaacaagctgtggaacgccagccgctttgtgctgatgaacgcggaa
ggtcaagactgtggcttcaacggcggcgagaaagtgctgtcgctggcggaccgctggatc
ctggccgaattcaaccgtacggtgaaggcataccgcgaagcactggacacctaccgcttc
gatctggccgccaacatcctgtacgaattcacctggaaccagttctgtgactggtacctg
gagctgaccaagccggtcgtgagcaacggcagcgaagcggaacagcgcggcactcgccac
acgctgatcaccgtgctggaagccctgctgcgcctggcgcacccggtgatcccgttcatt
accgaaaccatctggcagcgcgtgaaaaccctgaccggcgaaaccgcagacaccatcatg
ctgcagccgttcccagagtacgacgccgcgctggaagacacgcaggcgctgaacgacctg
gagtggatcaagcaggcgatcaccgcggtgcgcaacatccgcgccgagatgaacatcgcc
ccaagcaaacagctggacgtgctgctgcgcaactgcaacgccgacgcccagcgtcgcgtg
caggagaaccagagctttatcgagcgtctggcgcgcctggagtctatcgccctgctgcca
gccggtgacaaaggcccgttgtcggtcaccaaactggtggacggtgccgagctgctgatc
cctatggccggctttatcgataaagacgctgaaatcgcgcgtctgtcgaaagagatgggc
aagctggatgcggaaatcgcctcgatcgaaggcaagctgtcgaacgaaggttttgtggcg
cgcgcaccggaagcggtggtcgccaaagagcgcgagcgtctggcggcctgcaaagaaggc
aaagtgaaactgcaagagcagcaggcgagcatcgccgcgctgtaa
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