Serratia plymuthica 4Rx13: SOD_c04470
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Entry
SOD_c04470 CDS
T02710
Symbol
hgiDIIM
Name
(GenBank) modification methylase HgiDII
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl00270
Cysteine and methionine metabolism
srl01100
Metabolic pathways
Module
srl_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
SOD_c04470 (hgiDIIM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srl03000
]
SOD_c04470 (hgiDIIM)
03032 DNA replication proteins [BR:
srl03032
]
SOD_c04470 (hgiDIIM)
03036 Chromosome and associated proteins [BR:
srl03036
]
SOD_c04470 (hgiDIIM)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
srl02048
]
SOD_c04470 (hgiDIIM)
Enzymes [BR:
srl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
SOD_c04470 (hgiDIIM)
Transcription factors [BR:
srl03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
SOD_c04470 (hgiDIIM)
DNA replication proteins [BR:
srl03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
SOD_c04470 (hgiDIIM)
Chromosome and associated proteins [BR:
srl03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
SOD_c04470 (hgiDIIM)
Prokaryotic defense system [BR:
srl02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
SOD_c04470 (hgiDIIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
AGO53457
LinkDB
All DBs
Position
complement(487957..489009)
Genome browser
AA seq
350 aa
AA seq
DB search
MNFSAIDLFCGAGGLTCGLKDAGFKVLAGVEVEAVAADTYRTNHPDHVLYEADIRTLDPQ
KIMQELHLQPGDLDLLAGCPPCQGFSTHRTRNKCTSVTDQRNDLIFDLMRFVRAFEPKTV
MIENVPALAKDERITQVLNELRERGYLIGEKTLQVKDTAIYGVPQRRKRMILLASKHGDI
TEPEKSVNPKTVKDAIYHLPIPGNGDDSLHDFIPKRTDKIKEMIRHVPKDGGSRKDLPRN
FWLPCHLKNSDGYRDVYGRMSWDKVSPTITGGCTNPSKGRFLHPEQDRAITLREAAILQT
FPKNYIFSLERGRGFAALMIGNALPPAFICAHAQKILEHLKFIKGQEKEK
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgaatttttcagcaattgatctcttctgtggcgctggtgggctaacatgcggtttaaaa
gatgctgggttcaaagtccttgcaggggtcgaggtcgaagctgttgcagcagatacatat
cgaaccaaccaccccgaccatgttctatatgaagccgatataagaacattagacccccag
aaaattatgcaagaacttcatctacaaccaggtgatctggatctgttggctggctgccca
ccctgtcaagggttctccacccatagaactcgcaacaagtgcacatctgtcacagatcaa
cgaaatgatctgatctttgatttaatgcgttttgtccgtgcttttgagcccaagaccgta
atgattgaaaatgtgcctgctcttgctaaagacgagcgcattacccaagtcctcaatgag
ctacgtgaacgaggatatctcattggtgaaaaaacactgcaagttaaagatactgcgatt
tacggtgttccacaaagaagaaaaaggatgattttgcttgcatctaagcacggtgatatt
accgaaccagagaaaagcgtaaacccgaaaacagtcaaagatgcaatttaccacttacct
attccaggtaatggtgacgattcacttcatgattttattcctaaacgaacagataaaata
aaagaaatgatcagacacgttcctaaggatggcggttcacggaaagatttacctagaaat
ttttggctaccttgtcatttaaaaaattctgatggatatcgagatgtctatggcaggatg
tcatgggataaagtgtctccaactataactggcggctgtaccaacccatcaaaaggacgt
ttcctacaccccgaacaagatcgagctataactttaagagaagcggccattcttcaaaca
ttcccaaagaattatatattttctcttgaaagaggtagagggtttgcagcattaatgatt
ggaaatgctttgccacctgctttcatttgtgctcatgcacaaaaaatattagagcaccta
aaatttataaaaggacaggagaaggaaaaataa
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