Serratia plymuthica 4Rx13: SOD_c04720
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Entry
SOD_c04720 CDS
T02710
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
srl
Serratia plymuthica 4Rx13
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srl02000
]
SOD_c04720
Transporters [BR:
srl02000
]
Other transporters
Pores ion channels [TC:
1
]
SOD_c04720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
AGO53482
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Position
514485..516728
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AA seq
747 aa
AA seq
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MKSFNRSGIYLAVMSAMLPGAALAADTTDVGTISVKGQSLGGGMMVQDDSAKARSTVTKE
AMDKMPAAANAIDKLKYTPGLNVNSNDASGLSGVDYTMRGMNSDQIGLSMDGIPINDSGN
YAVYPNLLGDSENLEEVFVTQGSSEADGPHIGSSGGNIGMVTRRPAKDFGGFVKQTLGSN
NLSKTFARLETGEYNGFSNWLSYSHTEAKKWRGEGREYSNKFEMNSLYEDGNGNSSNLIM
KYNRQQNVNYNTLSKAQFENDGRDTDYATTPEYNSKGQLNKYYKLNRNPFDTFTLSFTQK
LQLRDNLSLTLQPYYYWGNGGSFTGQTASVLSNTSDKAGQYDLSNLKSNTYYRPSWTQTW
RPGITTKLKWDINDQHSLDIGYWYERARQLQTQPFIGIKDDGNPAQISGKPGGSDQVQDA
NGKTVQGRNQYTITPAQKVWLQDTWYATPDWTFVGGLAYQYVERKGDNRGSLYNVPEKRD
ATYHEFLPNFSASYKLNQENQVFYNLTRNMRTPPNYVLYNVGDSISTKPELSWNHELGWR
FQQEDMLMSATLFYMRYSDRQVSTTNSSGDYEMMNIGNVENKGLELEWSGQLPHNFNYHT
SYTYTQSKQKNDIVSNGGLPLPTSGKEVPNVPKNLLNMTLGYDDGLYYGSVSGKYVSSFY
GDLTNDEKIGGRTVFDLAAGVHLPVDKKIIKSAALRFGVSNLFDKEYLTSVRTTTFNAAP
YGGVKASTPYYNVGEERTFSVSLEATF
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctttcaatcgatctgggatttatctggcggtgatgtcggcgatgctgccgggc
gcggcgctggcggcggacaccaccgacgtcggtaccatcagcgtgaaggggcagtcgctg
ggcggcggcatgatggtgcaggacgacagcgccaaggcgcgctccaccgtcaccaaagag
gcgatggacaaaatgcccgcagcggccaatgccatcgacaagctgaaatacacgccaggc
ctgaacgtcaacagcaacgacgccagcggcctgagcggcgtcgattacaccatgcgcggc
atgaactcggatcagatcggcctgtcgatggacggtatcccgatcaacgactccggcaac
tatgccgtctatccgaacctgctgggcgattcggagaacctggaggaagtgttcgtcacc
cagggatcatccgaggcggacggcccgcacatcggctccagcggcggcaatatcggcatg
gtgacgcgccgcccggcaaaagatttcggcggcttcgtcaagcagacgctgggcagcaac
aacctgagcaaaacctttgcccgtttggaaaccggcgagtacaacggtttcagcaactgg
ctctcctactcgcacaccgaggcgaaaaagtggcgcggggaagggcgcgaatattccaac
aagttcgaaatgaactcgctgtacgaagacggcaacggcaacagcagtaacctgatcatg
aagtacaaccgccagcagaacgtcaactacaacaccctgagcaaggcgcagttcgaaaac
gacgggcgcgataccgactacgccaccacgccggaatacaacagcaagggccagttgaac
aagtactacaaactcaaccgcaacccgttcgataccttcacgctgtcattcacccagaag
ctgcaactgcgcgacaatctgtcgctgaccctgcagccgtattactactggggcaacggc
ggcagctttaccggccagacggcgtcggtgctgtccaatacgtcggacaaggccgggcag
tacgatctgagcaatctgaagtccaacacctattaccgcccttcctggacccagacctgg
cgccccggcattaccaccaagctgaagtgggacatcaacgatcagcacagcctggatatc
ggctactggtatgaacgtgcgcgtcagctacagacccagccgtttatcggcatcaaggac
gacggcaacccggcgcagatttcgggcaaaccgggcggttccgatcaggtgcaggacgcc
aacggcaagaccgtgcaggggcgtaaccaatacaccatcaccccggcgcagaaagtgtgg
ctgcaggacacctggtacgccacgccggactggaccttcgtcggcgggctggcctatcag
tacgtggagcgtaaaggggacaaccgcggcagcctgtacaacgtgccggagaagcgcgat
gccacttaccacgaattcctgcctaacttcagcgccagctacaagctgaaccaggaaaat
caggtgttctataacctgacgcgcaacatgcgcaccccaccgaactacgtgctgtacaac
gtcggcgactcgatcagcaccaagccggagctgagctggaaccacgagctgggctggcgt
ttccagcaggaagacatgctgatgagcgccacgttgttctatatgcgctacagcgatcgt
caagtctccaccaccaactcgtccggcgattacgagatgatgaacatcggcaacgtggag
aacaaagggctggagctggagtggagcggccaattgccgcacaactttaactaccacacc
tcatacacctatacccagtcgaagcagaagaacgacattgtcagcaacggcgggctgccg
ctaccgacgtccggcaaagaggtgccgaacgtgccgaaaaacctgctgaacatgacgctg
ggctacgacgacggcctgtattacggcagtgtcagcggcaaatacgtcagctcgttctac
ggcgatctgaccaacgacgagaagatcggcggccgcacggtgttcgatctggcggcgggg
gtgcatttgccggtggacaagaaaatcatcaaaagcgcagcgctgcgctttggcgtcagc
aacctgtttgacaaggaatacctgacctcggtgcgtaccaccaccttcaacgccgcgcct
tatggcggcgtgaaagccagcacgccgtattacaacgtcggggaagagcgcacctttagc
gtgtcgctggaagccaccttttaa
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