Serratia plymuthica 4Rx13: SOD_c05040
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Entry
SOD_c05040 CDS
T02710
Symbol
ampH
Name
(GenBank) D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH
KO
K18988
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:
3.4.16.4
3.4.21.-]
Organism
srl
Serratia plymuthica 4Rx13
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
srl01002
]
SOD_c05040 (ampH)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
srl01011
]
SOD_c05040 (ampH)
Enzymes [BR:
srl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SOD_c05040 (ampH)
Peptidases and inhibitors [BR:
srl01002
]
Serine peptidases
Family S12: D-Ala-D-Ala carboxypeptidase B family
SOD_c05040 (ampH)
Peptidoglycan biosynthesis and degradation proteins [BR:
srl01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
SOD_c05040 (ampH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-lactamase
Peptidase_S11
DnaT_2
Motif
Other DBs
NCBI-ProteinID:
AGO53514
LinkDB
All DBs
Position
complement(550528..551670)
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AA seq
380 aa
AA seq
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MKNSFRASLLALSLCAAPLAAQAADPQLASQIVDQYAEHIFFNSGATGMALVVIDNNQVV
NRSFGDTKPGNDLRPRPDSLIRIASITKLMTSEVMVKMAAEGRVKLTDPLRKYAPPGAFV
PAYNSRQPITLLNLATHTSSLPREQPGQKPAKTPVFTWPTKAQRWQWLEHANVTVPPGVR
AAYSNLAYDLLADALSRAANKPYSALLREKITAPLGMVDTTLTPSAEQCSRLMVAAAGPS
ACRDTTAAAGSGGVYSTPRDMQRWMQQFLSSNTAGARKSTAASEQTMYFQRSDLVSLKGM
DVPGEASALGLGWVYMAPKDGLPGIIQKTGGGGGFITYMAMIPQKNIGVFVVVTRSDLTK
FTNMSDPVNRLVGDLAANKS
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaactctttccgcgcttcattgctggcgctgagcctgtgcgccgcgccactggcc
gctcaagccgccgacccgcaactggcctcgcaaatcgtcgaccagtatgccgaacacatt
ttcttcaacagcggcgccaccggcatggcgctggtggtgattgataacaatcaggtggtt
aaccgcagctttggcgataccaagccgggcaacgatctgcgcccgcgcccggattcgctg
atccgcatcgcctcgatcaccaagctgatgaccagcgaagtgatggtcaaaatggcggcg
gaaggccgggtcaagctgaccgatccgctgcgaaaatacgccccgccgggcgccttcgtg
ccggcttataattcgcgccaacccattaccctgctgaacctggcgacccacaccagctcg
ctgccgcgcgagcaaccgggtcaaaaaccggcgaaaacgccggtgttcacctggccgacc
aaggcacagcgctggcagtggctcgaacacgccaatgtcacagtgccgccgggcgtgcgc
gccgcctattccaacctggcctatgatctgctggcggatgccttatcgcgagcggcaaac
aaaccttatagcgctctgctgcgcgaaaaaatcaccgcgccgctcggcatggtcgacacc
acccttacccccagcgccgaacagtgttcgcgcctgatggtggcggccgccgggccaagc
gcctgtcgcgataccaccgcagcagccggcagcggcggggtttattccaccccgcgcgac
atgcagcgctggatgcaacagttcctctcttccaacaccgccggcgcacgcaaatcgacg
gcggccagcgaacaaaccatgtacttccagcgcagcgatctggtgtcgctgaaaggcatg
gacgtaccgggtgaagcaagcgcgttgggattgggttgggtgtatatggcaccgaaggac
ggcctgccgggcattattcagaaaaccggcggcggcggtggctttataacctatatggcg
atgatcccgcagaaaaatatcggcgtcttcgtggtggtaacccgctcagatctgactaaa
ttcaccaatatgagcgatccggttaaccggctggtgggggatttggcggccaacaaaagc
tag
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