Serratia plymuthica 4Rx13: SOD_c05800
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Entry
SOD_c05800 CDS
T02710
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large chain
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl00220
Arginine biosynthesis
srl00240
Pyrimidine metabolism
srl00250
Alanine, aspartate and glutamate metabolism
srl01100
Metabolic pathways
srl01110
Biosynthesis of secondary metabolites
srl01240
Biosynthesis of cofactors
Module
srl_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
SOD_c05800 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SOD_c05800 (carB)
00220 Arginine biosynthesis
SOD_c05800 (carB)
Enzymes [BR:
srl01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
SOD_c05800 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATP-grasp_4
ATPgrasp_Ter
CoA_binding_2
BamE
Motif
Other DBs
NCBI-ProteinID:
AGO53587
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All DBs
Position
634390..637614
Genome browser
AA seq
1074 aa
AA seq
DB search
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLAEFGVTMIGATA
DAIDKAEDRRRFDVAMKKIGLDTARSGIAHNMEEALAVAADVGFPCIIRPSFTMGGTGGG
IAYNREEFEEICERGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAM
GIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFSVNPKNGRLIVIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVNLDDPEA
LTKIRRELKDAGCDRIWYIADAFRAGMSVDGVFNLTNVDRWFLVQIEELVRLEEQVAESG
INGLTQEFLRTLKRKGFADARLATLAGVAESEIRKLRHGYGLHPVYKRVDTCAAEFATDT
AYMYSTYEEECESNPTNDRPKVMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVN
CNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARELEAAGVP
IIGTSPDAIDRAEDRERFQQAVHRLGLKQPANATVATIEQAVEKAAGIGYPLVVRPSYVL
GGRAMEIVYDEIDLRRYFQNAVSVSNDAPVLLDRFLDDAVEVDVDAICDGERVLIGGIME
HIEQAGVHSGDSACSLPAYTLSKEIQDVMRQQVEKLAFELQVRGLMNVQFAVKNNEVYLI
EVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLAEQGVTEEVIPPYYSVKEVVLPFNKF
PGVDPILGPEMRSTGEVMGVGRTFAEAFSKAMLGSQSGMKKQGRALLSVREGDKARVVDL
AASLLKQGFELDATHGTAVVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIVNTTAGR
QAIEDSKLIRRSALQYKVHYDTTLNGGFATAMALKADPTEQVTSVQELHARITK
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtacagacataaaaagcatcctgatcctcggcgctggcccgattgtcatc
ggccaggcgtgtgagttcgactattcgggtgcccaggcgtgtaaagcgctgcgcgaagaa
ggttaccgggtcattctggtaaactccaacccggccaccatcatgaccgacccggaaatg
gccgatgcgacctacatcgagccgatccactgggaagtggtgcgtaaaatcatcgaaaaa
gagcgcccggatgcggtattgccgaccatggggggccagaccgcgctgaactgtgcgctg
gagctggagcgtcagggcgtgctggccgagttcggcgtgaccatgattggcgccacggcc
gacgctatcgacaaagccgaagaccgccgccgtttcgacgtggcgatgaagaaaatcggc
ctggatactgcgcgttccggtatcgcgcataatatggaagaagcgctggcggttgccgct
gacgttggcttcccgtgcatcatccgcccttcctttaccatgggcggcaccggtggcggt
atcgcatacaaccgcgaagagttcgaagagatctgcgagcgcggcctggatctgtcgcca
accaaagagctgttgatcgacgaatcgctgatcggctggaaagagtacgagatggaggtg
gtgcgcgataagaacgataactgcatcatcgtctgctctatcgaaaacttcgacgccatg
ggcatccataccggtgactccatcaccgtggcaccggcgcaaacgctgaccgacaaagaa
taccaaatcatgcgtaacgcctcgatggcggtgctgcgtgaaatcggcgtggaaaccggc
ggttccaacgtgcagttctcggttaacccgaaaaacggtcgcctgatcgtcatcgaaatg
aacccgcgcgtgtcccgttcttctgcgctggcgtcaaaagccaccggcttcccgattgcc
aaaatcgccgccaagctggcggtgggttacaccctcgacgaactgatgaacgacatcacc
ggcggccgcactccggcgtcctttgagccgtccatcgactacgtggtgaccaaaattcct
cgctttaacttcgagaaatttgccggcgctaacgaccgcctgaccacccagatgaaatcc
gtcggcgaagtgatggcgattggccgcactcaacaagagtcgctgcagaaagcgctgcgc
ggtctggaagtgggcgccaccggcttcgacccgaaagtgaacctggacgatccggaagcg
ctgaccaaaatccgtcgcgaactgaaagatgccggttgcgaccgtatctggtacatcgca
gacgcgttccgtgcaggcatgtcggttgacggcgtgtttaacctgaccaacgttgaccgc
tggttcctggtgcagattgaagagctggtgcgtctggaagagcaggttgcggaatccggc
atcaacggcctgacccaggaattcctgcgtaccctgaagcgtaaaggtttcgccgatgcg
cgcctggccacgctggccggcgtagccgagagcgaaatccgcaagctgcgccacggctat
ggcctgcacccggtttacaaacgtgtggatacctgtgcggcggaattcgccaccgacacc
gcctacatgtactccacttatgaagaagagtgcgagtccaacccgaccaacgaccgtccg
aaagtgatggtgctgggcggcggtccgaaccgtatcggccagggcatcgagttcgactac
tgctgcgtgcacgcctcgctggcgctgcgcgaagacggttacgaaaccattatggtcaac
tgtaacccggaaaccgtttccaccgactacgacacgtccgaccgcctgtatttcgagccg
gttacgctggaagacgtgctggaaatcgtgcgcatcgagaagccgaaaggcgttatcgtg
cagtacggcggccagactccgctgaagctggcgcgtgagctggaagcagcaggcgtgccg
attatcggtaccagcccggatgcgattgaccgtgccgaagaccgtgagcgtttccagcag
gcggtacaccgcctgggcctgaaacagccggccaatgccaccgttgccaccatcgaacag
gcggtagagaaagcggccggtatcggttacccgctggtggtgcgtccttcctacgtactg
ggcggccgtgcgatggagatcgtctacgacgaaatcgacctgcgtcgttacttccagaac
gccgtcagcgtctccaacgacgcgccagtgctgctggaccgcttcctggatgatgcggta
gaagtggacgtcgatgccatttgcgacggtgagcgcgtgctgattggcggcatcatggaa
catatcgaacaggctggcgtgcactccggtgactccgcctgttcactgcctgcttacacc
ctgagcaaagaaattcaggatgtgatgcgccagcaggtcgagaaactggcgttcgagctg
caggtgcgcggtctgatgaacgtacagttcgcggtgaagaacaacgaagtctacctgatt
gaagtcaacccgcgtgccgcacgtaccgtgccgttcgtttccaaagccaccggcgtgccg
ctggccaaggtagccgcacgggtcatggcgggcaagacgctggccgagcagggcgtaacg
gaagaagttatcccaccttactactcagtgaaagaagtggtgctgccgttcaacaagttc
cctggcgtcgacccgattctggggccggaaatgcgttctaccggggaagtgatgggcgtt
ggtcgcaccttcgcggaagccttctccaaggcgatgctcggcagccagtcaggcatgaag
aaacaaggccgtgcgctgctgtctgtgcgtgaaggcgataaagcccgcgtggtggatctg
gcagcaagcctgctgaaacagggcttcgagctggatgcgacccacggcactgcggtagtg
ctgggcgaggcgggcattaacccgcgtctggtcaacaaggtgcatgaaggccgtccgcac
attcaggaccgtatcaagaatggcgagtacacctacatcgtgaataccacggccggtcgc
caggcgattgaggactccaagctgattcgccgcagcgcgctgcagtacaaggtgcattac
gacaccaccctgaacggcggctttgccaccgcgatggcgctgaaagcggatccgaccgag
caagttacctcagtgcaggagctgcatgctcgcatcaccaagtaa
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