Serratia plymuthica 4Rx13: SOD_c06230
Help
Entry
SOD_c06230 CDS
T02710
Symbol
murF
Name
(GenBank) UDp-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase MurF
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl00300
Lysine biosynthesis
srl00550
Peptidoglycan biosynthesis
srl01100
Metabolic pathways
srl01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SOD_c06230 (murF)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SOD_c06230 (murF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SOD_c06230 (murF)
Enzymes [BR:
srl01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
SOD_c06230 (murF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Lipase_GDSL_2
Motif
Other DBs
NCBI-ProteinID:
AGO53630
LinkDB
All DBs
Position
689814..691175
Genome browser
AA seq
453 aa
AA seq
DB search
MIPVSLQALADVLSAELIGADCQIIEVTTDTRQVTAGCLFVALKGERFDAHAFAADAVAA
GAGALLVSKRLLVDVPQLVVKDTRLALGQLAAWVRQQVPARVVALTGSSGKTSVKEMAAA
ILRECGEVLYTAGNFNNDIGVPLTLLRLQPQHDFAVIELGANHIGEIAYTTALTRPQTAL
VNNLAAAHLEGFGSLAGVAQAKGEIFTGLPADGVAIINADNNDWPHWQSMLNDKTVWRFS
PQAAEGVDFFASDVLVNAKGTQFTLHSPFGTATIALPLPGRHNVANALAAAALAMSVGAS
LEAVRQGLKQLQGVPGRLFPIALTENKLLLDDSYNANVGSMTAAAQVLAEMPGYRVMVVG
DMAELGADAEECHRQVGEAARLAGIDKVIGIGPLSQALCAASGSGEHFQDKAAVIARVAE
LLSEHAVITVLIKGSRSAAMEQVVRALQEKAPC
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgattcctgtctcccttcaggcactggccgatgtattgagcgctgagttgatcggcgcc
gattgccaaatcattgaggtgacgacagatacccgccaggtaaccgcaggttgcctgttt
gtggcgctgaagggcgagcgttttgatgcgcatgccttcgctgccgatgctgtagccgca
ggcgctggggcgctgctggtgagtaagcgcttattggtggacgtaccgcaactggtggtg
aaagacacgcgtttggcgctggggcaactggctgcctgggtgcgccagcaagtgccggcc
cgcgttgtggcgttaaccggttcatcgggcaagacctcggtgaaggaaatggccgccgct
attttgcgtgaatgcggtgaagtgctgtataccgccggtaacttcaacaacgatatcggc
gtgccgctgacgctgctgcgtttgcaaccgcagcatgattttgccgtgattgagctgggt
gccaaccatattggcgagattgcctataccaccgcattaacgcggccacagaccgccctg
gtgaataacctggcggcggctcacctggaaggttttggctctttggccggcgtcgcccag
gcgaaaggtgaaatttttaccggcttgccggctgacggcgtggcgatcatcaacgccgac
aataacgactggccgcattggcagagcatgctgaacgataaaaccgtctggcgcttctcg
ccgcaggcggcggaaggcgtggatttcttcgccagcgacgtgctggtgaacgccaaaggc
acgcaatttacgttgcacagcccgttcggcaccgcgacgatagcgctgccgttaccgggc
cgccataacgtggccaatgcgctggccgcagcggcgctggccatgtcggtcggtgcgtcg
ctcgaagccgtgcgccaggggttgaaacagttgcagggggtgccggggcgtttgttcccg
attgcgcttaccgaaaacaagctgctgctcgatgacagctataacgccaacgtcggctcg
atgaccgccgcagcgcaggtattggcagagatgccgggctaccgcgtaatggtggttggc
gatatggccgagctgggggcggatgccgaagagtgtcaccgccaggtgggtgaagcggcc
cggctggccggcatcgataaagtgataggtatcggtccgttaagccaggcgctgtgcgcg
gcttccggcagcggcgaacattttcaggacaaggcagcagtgatcgcgcgcgtggcggag
ttactgtcggaacatgcggtaattaccgtgttaatcaagggttcacgtagtgccgcaatg
gagcaggtagtacgcgcgttacaggagaaagcaccatgttag
DBGET
integrated database retrieval system
