Serratia plymuthica 4Rx13: SOD_c06250
Help
Entry
SOD_c06250 CDS
T02710
Symbol
murD
Name
(GenBank) UDp-N-acetylmuramoylalanine--D-glutamate ligase MurD
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl00470
D-Amino acid metabolism
srl00550
Peptidoglycan biosynthesis
srl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SOD_c06250 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SOD_c06250 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
srl01011
]
SOD_c06250 (murD)
Enzymes [BR:
srl01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
SOD_c06250 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
srl01011
]
Precursor biosynthesis
Amino acid ligase
SOD_c06250 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AGO53632
LinkDB
All DBs
Position
692254..693573
Genome browser
AA seq
439 aa
AA seq
DB search
MADYQGKKVVIIGLGLTGLSCVDFFMARGVTPRVMDTRISPPGLDKLPESVERHLGDLNL
DWLLAADLIVASPGMALAHPALSAAADAGVEIIGDVELFCREAQAPIVAITGSNGKSTVT
TLVGEMAKAAGWAVGVGGNIGLPALSLLRQECQLYVLELSSFQLETTFSLKAAAATILNV
TEDHMDRYPFGLQQYRAAKLRVYENAALCVVNADDALTMPVRGADQRCISFGADVGDYHL
NRQQGETWLRVRGEKILNTREMKLTGRHNYTNALAALALADAVNIPRASSLKALTTFTGL
AHRFQLAWEHNGVRWINDSKATNVGSTEAALNGLQVDGTLHLLLGGDGKSADFSPLGRYL
QGDNVRLYCFGRDGEQLAELRPEVATLTDTMEQAMQAIAGRVQPGDMVLLSPACASLDQF
RNFEVRGDEFARLAQELGG
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggcggattatcagggtaaaaaagtggtcatcatcgggttaggcctcaccggcctgtcc
tgcgttgatttctttatggcgcgtggcgtaacgccgcgcgttatggatacccgtatttcg
ccgccggggctggacaagctgcctgaaagcgttgaacggcatttgggtgacctgaatctg
gactggttgctggcggcggatttgatcgttgccagcccgggcatggcgctggctcacccg
gcgttgagcgctgcggcggatgcgggggtggagattatcggcgacgtcgaactgttctgc
cgcgaagcccaggcgccgatcgtagcgatcaccggttccaacggtaaaagcaccgtcacc
actctggtgggcgagatggcgaaagcggccggctgggcggtgggtgtgggcggtaatatt
ggcctgcctgcgctgagcctgctgcgtcaggaatgccagctgtacgtgctggagctgtca
agtttccaactggaaaccaccttcagcctgaaagcggcggcggcgaccatcctgaacgtg
acagaagatcatatggaccgttacccgtttggcctgcagcagtatcgcgccgccaaactg
cgcgtctatgaaaatgccgccctgtgcgtggttaacgcagatgacgcgctgaccatgccg
gtacgcggcgcagaccagcgctgcatcagtttcggggccgacgtgggcgactaccacctc
aaccgccagcagggcgaaacctggttgcgcgtgcgcggtgagaaaatcctgaatacccgc
gagatgaagctgactggccgccacaactataccaatgcgctggctgcgttggcgctggcc
gatgcggtgaatatcccgcgcgcctccagcctgaaggcgctaactacctttaccgggttg
gcgcaccgtttccaactggcgtgggaacacaacggcgtacgttggattaacgattcgaaa
gccaccaacgtcggcagcaccgaagcggcgttgaatggcctgcaagtggacggcactttg
catctgctgctgggcggcgacggcaagtctgccgatttctccccgctggggcgctatctg
cagggcgataacgtccgcctgtattgcttcggccgcgatggcgaacaattggcggagctg
cggccggaagttgccacgctgaccgacacgatggaacaggcgatgcaagcgatcgcgggc
cgggtacaacctggcgatatggtgctgctgtcaccggcgtgcgccagcctggatcagttc
cgtaactttgaagtgcgtggcgacgagtttgcccgtctggcacaggagcttggcggatga
DBGET
integrated database retrieval system
