Serratia plymuthica 4Rx13: SOD_c07220
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Entry
SOD_c07220 CDS
T02710
Symbol
ffh
Name
(GenBank) signal recognition particle protein Ffh
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl02024
Quorum sensing
srl03060
Protein export
srl03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
SOD_c07220 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SOD_c07220 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SOD_c07220 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
srl02044
]
SOD_c07220 (ffh)
Enzymes [BR:
srl01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
SOD_c07220 (ffh)
Secretion system [BR:
srl02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
SOD_c07220 (ffh)
Eukaryotic Sec-SRP protein
SOD_c07220 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
cobW
AAA_31
AAA_30
AAA_24
AAA_33
KTI12
YqeC
APS_kinase
AAA_14
Fe-ADH_2
AAA_19
VirC1
AAA_16
ArsA_ATPase
TsaE
Motif
Other DBs
NCBI-ProteinID:
AGO53725
LinkDB
All DBs
Position
800691..802115
Genome browser
AA seq
474 aa
AA seq
DB search
MLSSPQLCRQSGLSLHVEHETMFENLTDRLSRTLRNISGRGRLTEENIKETLREVRMALL
EADVALPVVRDFINRVKESAVGHEVNKSLTPGQEFVKIVKSELIAAMGEVNTELNLAAQP
PAVVLMAGLQGAGKTTSVAKLGKFLKEKQKKKVLVVSADVYRPAAIRQLETLAEGVGIDF
FPSDVKEKPIDIVNRALQQAKLKFYDVLIVDTAGRLHVDEAMMDEIKQVHAAIKPVETLF
VVDAMTGQDAANTAKAFNEALPLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKT
DALEPFHPDRVASRILGMGDVLSLIEDIESKVDREQAEKLANKLKKGDGFDLTDFLEQLK
QMRNMGGMANMLSKLPGAGQLPDNVKSQMDDKVLVRMEAIINSMTLKERAKPEIIKGSRK
RRIAMGSGMQVQDVNRLLKQFDEMQRMMKKMKKGGMAKMMRGMKGMMPPGFPGR
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
gtgttatcatcgccgcaattgtgtcgccaaagcggcctgtcattacacgttgagcatgag
acgatgtttgaaaatttaaccgatcgattgtcgcgcacactgcgcaatatcagcggccgt
gggcggctgaccgaagagaatatcaaggaaaccctgcgtgaagtgcgcatggcgttgctg
gaagcggacgttgcgctgccggtagtgcgcgactttatcaaccgcgtcaaagagagtgcg
gtggggcatgaagtcaacaagagcctgacgccggggcaagaattcgtcaagatcgtcaag
agcgagctgattgccgcgatgggcgaagtgaataccgagctgaatctggcggcgcagcca
ccggccgtggtgctgatggcgggcctgcaaggtgccggtaaaaccaccagcgtcgccaag
ctcggcaaattcctgaaagaaaaacagaagaaaaaagtgttggtggtttccgcggacgtt
taccgtccggcggcgatcaggcagttggaaacgttggcggaaggcgtcggcatcgatttc
ttcccgtcggatgtcaaagaaaagccgatcgacatcgttaaccgtgcattgcagcaggcc
aagctgaaattctacgacgtgctgatcgtcgataccgccggccgtttgcacgtagacgaa
gcgatgatggacgagatcaaacaggtgcatgcggcgatcaagccggtggaaaccctgttt
gtggtcgatgccatgaccggtcaggatgccgccaatacggccaaggcctttaacgaggcg
ctgccgctgaccggcgtagtgctgaccaaggtcgacggcgacgcgcgtggcggtgccgcg
ctgtctatccgtcacatcaccggcaagcccatcaagttcctcggtgtgggcgagaagacc
gatgcgctggagccattccatccagaccgcgtagcgtcacgtattctcggcatgggcgat
gtgttgtcgctgatcgaagatatcgaaagcaaggttgaccgcgagcaagcggaaaaactg
gctaacaaactgaagaagggcgacggtttcgatctgaccgacttcctggagcagttgaag
cagatgcgtaacatgggcggcatggcgaacatgctgagcaaattgcccggtgccggccaa
ttgccggacaatgtgaaatcgcagatggacgataaagtgctggtgcgcatggaggcgatc
atcaactcgatgacgctgaaagagcgcgccaaaccggaaatcatcaagggttcgcgcaaa
cgtcgtatcgcgatgggctccggcatgcaggtgcaagatgttaaccgcttgttaaagcag
ttcgacgaaatgcagcgcatgatgaagaagatgaagaaaggcgggatggcgaagatgatg
cgcggcatgaaaggtatgatgccgccgggcttcccaggccgctga
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