Serratia plymuthica 4Rx13: SOD_c07680
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Entry
SOD_c07680 CDS
T02710
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl03030
DNA replication
srl03430
Mismatch repair
srl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SOD_c07680 (dnaQ)
03430 Mismatch repair
SOD_c07680 (dnaQ)
03440 Homologous recombination
SOD_c07680 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srl03032
]
SOD_c07680 (dnaQ)
03400 DNA repair and recombination proteins [BR:
srl03400
]
SOD_c07680 (dnaQ)
Enzymes [BR:
srl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SOD_c07680 (dnaQ)
DNA replication proteins [BR:
srl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SOD_c07680 (dnaQ)
DNA repair and recombination proteins [BR:
srl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SOD_c07680 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AGO53766
LinkDB
All DBs
Position
844790..845530
Genome browser
AA seq
246 aa
AA seq
DB search
MISTTTRQIVLDTETTGMNKLGVHYEGHRIIEIGAVEVINRRLTGRHYHVYVKPDRLVDP
EAYGVHGISDEFLADKPTFDQIADEFIDFIRGGELVIHNASFDIGFMDHEFRMLQKGLPK
TDTFCTITDSLLMARRLFPGKRNNLDALCGRYEIDNSKRTLHGALLDAEILAEVYLAMTG
GQTSMAFQMEGDTQHNDSTQDIQRIVRPATAMKVVYASDAEVVAHEARLDLVAKKGGSCL
WRAEAE
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgatctctacaaccaccagacagattgtcctcgataccgaaaccaccggtatgaacaaa
ctcggggtgcattacgaaggccaccgcatcattgaaattggcgcagtggaagtgattaac
cgtcgcctgaccggccgccactatcacgtttacgtcaaacctgatcggctggtggatcct
gaagcctacggggttcacggcatcagcgacgagttcctggcggataagcccacgttcgac
caaatcgccgatgagttcatcgacttcattcgtggcggtgagttagtcatccataatgcg
tcgttcgacatcggctttatggatcacgaattccgcatgttgcagaaggggctgccgaag
accgacaccttctgcaccatcaccgacagcctgttgatggcgcgccgcctgttcccgggc
aagcgcaacaaccttgacgccctttgcggccgctatgagatagacaacagcaagcgtacg
ctgcacggcgcattgctcgatgccgagatcctggcggaagtttatctggcgatgaccggc
ggccagacgtcgatggcgttccagatggaaggcgacacgcagcataacgactcgacgcag
gatatacagcgcattgtccgtccggcgacggcgatgaaagtggtctatgccagcgatgca
gaagtggtcgcccatgaggcgcgactggatttggtggcgaaaaagggcggcagttgcctg
tggcgtgcggaagcggaataa
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