Serratia plymuthica 4Rx13: SOD_c08160
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Entry
SOD_c08160 CDS
T02710
Symbol
dinB
Name
(GenBank) DNA polymerase IV
KO
K02346
DNA polymerase IV [EC:
2.7.7.7
]
Organism
srl
Serratia plymuthica 4Rx13
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srl03400
]
SOD_c08160 (dinB)
Enzymes [BR:
srl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SOD_c08160 (dinB)
DNA repair and recombination proteins [BR:
srl03400
]
Prokaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
SOD_c08160 (dinB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH
HHH_5
POLH-Rev1_HhH
Cdd1
DNA_pol_lambd_f
HHH
Motif
Other DBs
NCBI-ProteinID:
AGO53813
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All DBs
Position
893466..894527
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AA seq
353 aa
AA seq
DB search
MRKIIHVDMDCFFAAVEMRDDPSLRDIPLAIGGSADRRGVISTANYPARRYGVHSAMSTA
MALKLCPHLKLLPGRMAAYKEASLHIREIFARYTPLIEPLSLDEAYLDVTDCTQCNGSAT
LIAQEIRQAIAEELNLTASAGIAPIKFLAKIASELNKPNGQYVITPAQVPAFLQQLPLSK
IPGVGKVTAKRLEEVGLITCADVQQYDLALLLKRFGKFGRVLWERCQGIDLREVSPERLR
KSVGVERTLAEDIHDWEDCEALIVDKLYPELEMRLRKVKPDLHIARQGVKLKFQDFQQTT
QEHVWPVLNKDDLLNVARQAWRERREGRGVRLVGLHVTLLDPQLERQLLLPWE
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaaaatcattcatgtcgatatggactgcttcttcgcggcggtagaaatgcgcgac
gatcccagcctgcgcgatattccgttggcgattggcggcagcgccgaccgacgcggagtg
atcagcaccgccaactacccagcacgccgctatggcgtgcacagcgcgatgtcgacggcg
atggcgctcaaactgtgcccccacctcaagctgttgccaggccgcatggcggcgtacaag
gaagcctcgctgcacattcgcgaaatttttgcccgctacaccccgttgattgaaccgctg
tcgctggacgaagcctatctggacgtgaccgactgcacccagtgcaacggttcggcgacg
ctgatcgcccaggaaatccgccaggcgattgccgaagagcttaatctcacggcctctgcg
ggcatcgcaccgatcaagttcctcgccaaaattgcctcggagctgaacaaaccgaacggg
caatacgtcatcacgccggcgcaggtgccggcttttttgcagcaactgccgctgagcaaa
atccccggcgtgggtaaagtgaccgccaaacggctggaggaagtggggctgatcacctgc
gcagatgtgcagcagtacgatctggcgctgctgctcaagcgcttcggcaagtttggccgg
gtgctgtgggagcgctgccagggcattgatctgcgcgaggtttcgccggagcggctgcgt
aaatcggtgggggtggaacgcacgctggcggaagacattcatgactgggaagactgcgag
gcgctgattgtcgacaagctctatcccgagctggaaatgcggctgcgcaaggtgaaaccg
gatctgcatatcgcgcggcagggcgtgaagctgaagtttcaggattttcagcagaccact
caggaacacgtctggccggtgctgaataaagacgatttgctcaacgtggcgcggcaggcg
tggcgtgagcggcgggaaggccgtggcgtacggctggtgggcttgcacgtaacgctgctg
gatccgcagcttgagcggcaactgttgctgccgtgggaataa
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