Serratia plymuthica 4Rx13: SOD_c08820
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Entry
SOD_c08820 CDS
T02710
Symbol
rbsB1
Name
(GenBank) D-ribose-binding periplasmic protein RbsB
KO
K10439
ribose transport system substrate-binding protein
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl02010
ABC transporters
srl02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SOD_c08820 (rbsB1)
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
SOD_c08820 (rbsB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srl02000
]
SOD_c08820 (rbsB1)
Transporters [BR:
srl02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
SOD_c08820 (rbsB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AGO53879
LinkDB
All DBs
Position
964395..965336
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AA seq
313 aa
AA seq
DB search
MRFKPLITALLVTAALGSASVVQAKELKSIGVTVGDLANPFFVQITKGAELKARELAGDK
VNVTLVSSGYDLGQQVAQIDNFIAAKVDMIILNAADSKGIGPAVKRAKDAGIVVVAVDVA
AEGADATITSDNTQAGAMACKYISDRLKEKGNVVIINGPPVSAVQNRVEGCMTELKKHPD
IKLLSYNQNAKGSREGGLEIMTSLLAANPKIDGVFAINDPTAIGADLAAKQAQRSEFFIV
GVDGSPDGEEALKRDNSLFVATPAQDPQVMAAKAVEIGYDILQGKPAPTGPVLIPVTMID
KNNIGSYKGWTVK
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttcaagccattgattaccgctttgttggttaccgccgcgctcggcagcgcctct
gtggtccaggcgaaagaattgaaatcgatcggggtgacggtgggcgatctggccaacccg
ttctttgtgcagatcaccaagggcgcggagttgaaagcgcgtgagctggccggtgacaag
gtgaatgtgacactggtatcgagcggttacgatcttggccagcaggtggcgcagatcgac
aacttcatcgccgccaaggtcgatatgatcatcctcaacgccgccgattccaaaggcatc
ggcccggcggtcaaacgcgccaaggacgccggcatcgtggtggtggcggtagacgtggcg
gctgaaggcgccgacgccaccatcacttcggataacacccaggcgggtgcgatggcctgt
aaatacatcagcgatcgcctgaaagagaaaggcaacgtggtgatcatcaacgggccgccg
gtttctgcggtgcaaaaccgggtggagggctgcatgaccgagctgaagaaacacccggat
atcaagctgctgtcctataaccagaacgccaagggcagccgcgaaggcggcctggagatc
atgacctcgttgctggcggccaatccgaagatcgacggcgtattcgcgattaacgatccg
acggcgatcggcgccgatctggcggccaagcaggcgcagcgcagcgagttctttatcgtc
ggcgtagacggctcgccggacggtgaagaggcgctcaagcgcgacaactcgctgtttgtg
gcgacgccggcgcaggatccgcaggtgatggcggccaaggcggtcgagatcggttacgac
attctgcagggcaaacccgcgccaaccggcccggtgctgatcccggtgaccatgatcgat
aaaaacaatatcggcagctacaaaggctggacggtgaaataa
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