Serratia plymuthica 4Rx13: SOD_c08920
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Entry
SOD_c08920 CDS
T02710
Symbol
sbcD
Name
(GenBank) nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
srl
Serratia plymuthica 4Rx13
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srl03400
]
SOD_c08920 (sbcD)
DNA repair and recombination proteins [BR:
srl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SOD_c08920 (sbcD)
Archaeal homologous recombinant proteins
SOD_c08920 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AGO53889
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All DBs
Position
complement(976348..977580)
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AA seq
410 aa
AA seq
DB search
MRLIHTSDWHLGQYFFTKSRAAEHQAFLRWLIEQIEQQRVDALIVAGDLFDTGSPPSYAR
ELYNRFVVELQRTGCQLVVLGGNHDSVATLNESRELLSCLNTTVIANAQSDIRQQILVLN
QRDGQPGAVLCAIPFLRPRDLTTSRADESGTQKQQALQEAIAEHYQQLYQAACARRDELG
LTLPIVATGHLTTVGVTTSDSVRDIYIGTLDAFPAQAFPPADYIALGHIHRAQNVAKSEH
IRYSGSPIPLSFDELGKPKSVFMVDFAEGALQQVTALDIPSFQPMQLIKGDLAQIEQQLR
QFADYQGELPVWLDIEVATQDYLSDIQRRIQLLADQLPVEVVLLRRSKEQRRQALERQDK
ETLNELSVDEVFERRLAQETEITEPRQQRMRQMFHQVVEAVRHNDEEPTQ
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgatccacacctctgactggcatcttggccagtactttttcaccaaaagccgt
gccgccgagcaccaggcttttttacgctggctgatcgagcaaattgaacagcaacgggtg
gatgcgctgatcgtcgccggggatctgttcgacaccgggtcgccgccgagttacgcccgc
gagctgtataaccgcttcgtggtggagctgcagcgtaccggctgccaactggtggtgctg
ggcggtaaccatgactccgtggcaaccctgaatgaatcgcgtgaattgctttcttgcctg
aatacaacggtaatcgccaacgcccaaagcgacatccggcagcagatcctggtacttaac
cagcgcgacggccaaccgggtgcggtgttgtgcgccatcccgttcctgcgcccgcgcgat
ctgacgaccagccgcgccgacgaatcgggcacgcaaaagcagcaggcgttgcaagaggcc
atcgcggaacactatcaacagctctaccaagcggcctgcgcacgccgcgatgaactgggg
ctaaccttgccgattgtcgccaccggccacctgaccaccgtgggggttaccacctccgat
tcggtgcgcgatatttacatcggcacgctggatgccttcccggcgcaggcgtttccgccg
gccgactacattgcgttggggcatattcaccgggcgcaaaacgtcgccaaatccgagcat
atccgctacagcggttcgcctatcccgctcagtttcgatgagctgggcaaacccaagagc
gtgtttatggtggatttcgccgaaggcgccctgcaacaggtcaccgcactggatatcccc
agcttccagccaatgcaactgatcaagggcgatttggcgcagatcgagcaacaattgcgg
cagttcgccgattatcagggggagctgccggtatggctggatatcgaagtggccacgcag
gattacctcagcgacattcagcgccgtattcaactgctggcggatcaactgccggtggag
gtggtattgctgcgccgcagtaaagagcagcgccgccaggcccttgaacggcaagacaag
gaaacgctcaacgaactgagcgtcgatgaggtcttcgagcggcggttggcgcaggagacg
gaaatcactgagcctcgccagcagcggatgcgccaaatgttccatcaggtggtcgaggcc
gtacggcacaacgacgaggagccgacccaatga
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