Serratia plymuthica 4Rx13: SOD_c09700
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Entry
SOD_c09700 CDS
T02710
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl03030
DNA replication
srl03430
Mismatch repair
srl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SOD_c09700 (dnaX)
03430 Mismatch repair
SOD_c09700 (dnaX)
03440 Homologous recombination
SOD_c09700 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srl03032
]
SOD_c09700 (dnaX)
03400 DNA repair and recombination proteins [BR:
srl03400
]
SOD_c09700 (dnaX)
Enzymes [BR:
srl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SOD_c09700 (dnaX)
DNA replication proteins [BR:
srl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SOD_c09700 (dnaX)
DNA repair and recombination proteins [BR:
srl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SOD_c09700 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_4
AAA
AAA_22
RuvB_N
AAA_5
AAA_18
AAA_14
AAA_assoc_2
ResIII
AAA_30
AAA_2
AAA_16
nSTAND3
TsaE
RCF1-5-like_lid
AAA_7
AAA_24
Mg_chelatase
PIF1
SKI
Motif
Other DBs
NCBI-ProteinID:
AGO53966
LinkDB
All DBs
Position
1063537..1065486
Genome browser
AA seq
649 aa
AA seq
DB search
MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTTIARLLAK
GLNCETGITATPCGQCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPSHVKFLLATTDPQKLPVTILSRCLQFHLKALDV
DQIRNQLETVLQAENITSDQRALQLLARAADGSMRDALSLTDQAIAMGQGQVTTATVSQM
LGTLDDEQPLAILEALVSADGEKVMAQVAQAASRGVDWENLLIETLALLHRIAMVQLLPS
VLDNHYAAIEQRLRELARTLPPTDVQLYYQTLLVGRKELAFAPDRRMGVEMTLLRALAFH
PKAVIPEPVAPVQIAPAQMAQPRAPSAQPPQFQDAPPPLGQAAPQNNPPTNLPDATAQLL
KARTQLLRQGASTPKKNEPAAPGKARPANSALERLASVTERSQQRLAEKQVQEKPAKPEA
YRWRALTEPEAEPEPLATPKALRTALEHEKTPELSAKLVVESLERDPWAAEIDKLKIPKL
VQQLALNAVKQQLEPGKICLRLRSSQRHLNSPSAQKVLTDALSELYGSPVELTVVEDDNP
AERTPLEWRQAIYEEKLAQARQSIVADTNIQTLRRFFDADLDEESIRPL
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaggttcttgcccgtaagtggcgccctcaaacgtttgcagatgttgtcgga
caagaacacgtcctgacggcgctggccaacggcctctcgctggggcggattcatcacgcc
tatctgttttcaggcacgcgcggtgtgggtaaaaccaccattgcgcgcctgctggccaaa
ggcctgaactgtgaaaccggcatcaccgcgaccccgtgcggccaatgcgataactgccgc
gagattgagcaggggcgttttgtcgatctgatcgagatcgacgccgcgtccagaaccaag
gtggaagacacccgcgatctgctggataacgtccaatacgcgcccgcccgcggccgtttc
aaagtttacctgattgacgaagtgcacatgctctcgcgtcacagcttcaatgcgctgttg
aaaacgctggaagagccgccttcgcacgtgaagttcctgctggcgaccaccgatccgcaa
aagctgccggtgaccattctgtcacgctgcctgcaattccatctcaaagcgctggatgtc
gatcagatccgcaaccaactggaaacggtgttgcaggcggagaacatcaccagcgatcaa
cgtgcgttgcaactgttggcgcgcgccgccgacggcagtatgcgcgacgcgctcagcctg
accgaccaggcgattgccatggggcaaggtcaggtgacgaccgccaccgtcagtcagatg
ctgggcacgctggacgacgaacagccgttggccatccttgaggcgctggttagcgcagac
ggcgaaaaggtcatggcgcaggtcgcgcaggcggcttctcgcggcgtagattgggagaat
ttgctgatcgagacgctggcgctgttgcaccgcattgcgatggtgcaattgctgccgtcg
gtactggataatcattacgccgccattgaacaacggctgcgtgaactggcgcgtaccttg
ccgccgactgacgtacagctttattaccaaacgctgctggtagggcgcaaagagctggct
tttgcgccggatcgtcgcatgggggttgagatgaccctgctgcgtgcgttggcgtttcac
ccgaaagcggtgatcccggagccggtagcgccggtgcaaattgcccctgcgcagatggcg
cagccgcgggccccctcagcccagccgccacagtttcaggatgcgccaccgccgttaggg
caggccgcaccgcagaacaatccaccgacgaatctaccggatgccaccgcgcagttatta
aaagcgcgcacccaactgctgcggcagggagcatccacaccaaaaaagaatgagccggcg
gcgccaggaaaggcgcggccggcaaactcagcactggagcgtttggcttcagtgactgag
cgtagccagcagcgcctggcggaaaaacaggtgcaggaaaaaccggccaaaccggaagcc
taccgttggcgggcgctgaccgagccggaagcggagccggaaccgctggcgacgccgaaa
gcgttgcgcaccgcacttgagcatgagaaaacgcccgagctgtcggccaagctggtggtc
gagtcgcttgagcgtgatccctgggcggcagagatcgataagctgaaaatcccgaaactg
gtgcagcaactggcgttgaacgccgtgaaacaacagctggaaccaggcaaaatttgtctc
cgcctgcggtcttcgcagcgccatctgaactcgccttcggcgcagaaggtgctgactgac
gcgctcagcgagttgtacggcagcccggttgagttgaccgtggtggaagacgataatccg
gcggagcggactccgctggagtggcggcaagccatttatgaagaaaaactggcgcaggcg
cgccagtccatcgttgcggataccaatatccagacgctgcgccggttcttcgacgcggat
ctggatgaagagagtattcgccccctttaa
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