Serratia plymuthica 4Rx13: SOD_c11350
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Entry
SOD_c11350 CDS
T02710
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit SdhA
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl00020
Citrate cycle (TCA cycle)
srl00190
Oxidative phosphorylation
srl00650
Butanoate metabolism
srl00720
Other carbon fixation pathways
srl01100
Metabolic pathways
srl01110
Biosynthesis of secondary metabolites
srl01120
Microbial metabolism in diverse environments
srl01200
Carbon metabolism
Module
srl_M00009
Citrate cycle (TCA cycle, Krebs cycle)
srl_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
srl_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SOD_c11350 (sdhA)
00650 Butanoate metabolism
SOD_c11350 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
SOD_c11350 (sdhA)
00720 Other carbon fixation pathways
SOD_c11350 (sdhA)
Enzymes [BR:
srl01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
SOD_c11350 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
GIDA
Pyr_redox_2
DAO
BEX
FAD_binding_3
Thi4
FAD_oxidored
RBD_DGKtheta
Motif
Other DBs
NCBI-ProteinID:
AGO54125
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All DBs
Position
1252287..1254053
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AA seq
588 aa
AA seq
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MKLPVREFDAVVIGAGGAGMRAALQISQAGSTCALISKVFPTRSHTVSAQGGITVALGNN
HADNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAVLELEHMGLPFSRTDEGRIYQRPFG
GQSLNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGT
TAICIETGEVVYFKAKATVLATGGAGRIYQSTTNAHINTGDGVGMALRAGVPVQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREG
RGCDGPWGPHVKLKLDHLGKEVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGI
PTKVTGQALTVNEKGEDVVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGMHLQ
ESLAEQGESRDASESDVDASLERLNRWNNTRSGEDPVEIRKALQACMQHNFSVFREGDAM
AKGLEELKEIRERLKNARLDDTSSEFNTQRIECLELDNLMETAFSTAVSANFRTESRGAH
SRFDFPERDDANWLCHSLYQPQSESMTRREVNMQPKLRPAFPPKVRSY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgccggtcagagagtttgatgctgtagttatcggtgctggtggcgcaggtatg
cgcgcggcactgcagatttctcaagcgggctccacgtgcgccctgatatccaaagtattc
ccgacccgttcccataccgtgtctgcgcagggcggcattaccgtagccctgggcaataac
cacgcagataactgggaatggcatatgtatgacacggtgaaaggttccgattacatcggt
gaccaggacgccatcgaatatatgtgtaaaaccggcccggaagcggttctggagctggaa
cacatggggctgccgttctcccgtaccgatgaaggccgcatctatcagcgtccgttcggc
ggccagtcactgaactttggtggcgagcaggcggcacgcaccgcggcggcggcggaccgt
accggtcacgccctgttgcacaccctgtatcaacagaacctgaaaaaccataccaccatt
ttctccgagtggtatgcgctggatctggtgaaaaaccaggatggcgcggtggtgggcacc
acggctatctgtatcgaaaccggtgaagtggtgtacttcaaagccaaagctaccgtactg
gcgaccggcggtgcaggccgtatttaccagtccaccaccaacgcgcatatcaacaccggt
gacggtgtcggcatggcgctgcgcgccggcgtgccggtgcaggacatggaaatgtggcag
ttccacccgaccggcatcgccggtgctggggtattggtgaccgaaggttgccgtggtgaa
ggcggttacctgctgaacaaacacggcgagcgtttcatggagcgctatgcgccgaacgcc
aaagacctggcgggccgtgatgtcgttgcccgttcgatcatgattgaaatccgcgaaggc
cgcggttgcgacggtccgtgggggccacacgtcaagctgaagctggatcacctgggtaaa
gaggtgctggaatcccgtctgccgggcattctggaactgtcgcgcactttcgcacacgtc
gatccggtaaaagagccgatcccggtgatcccgacctgtcactacatgatgggcggcata
ccgaccaaggtgaccggccaggcactgaccgtgaacgagaaaggcgaagatgtggtgatc
ccgggtctgtttgccgtgggcgaaatcgcctgcgtatcggtacacggcgccaaccgcctg
ggcggcaactcgctgctggatctggtggtattcggtcgtgctgccggtatgcatttacag
gaatctctggcggagcagggcgagagccgtgacgccagcgaatcggatgtggatgcgtcg
ctggagcgcctgaaccgctggaacaacacccgttcgggtgaggatccggtcgaaattcgc
aaggcgctgcaagcctgtatgcagcacaacttctcggtattccgtgaaggtgatgccatg
gcgaaagggctggaagagttgaaagagatccgtgaacgcctgaagaacgcacgcctggac
gatacctccagcgaattcaacacccagcgcatcgaatgcctggagttggataacctgatg
gagactgcgttttccaccgccgtgtcggccaacttccgtaccgagagccgtggggcgcac
agccgcttcgatttcccggaacgcgatgatgccaactggctgtgtcattcgctgtatcag
ccgcaatcggaaagcatgacgcgtcgtgaagtgaacatgcaaccgaagctgcgcccggca
ttcccaccgaaagtgcgttcctactga
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