Serratia plymuthica 4Rx13: SOD_c12790
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Entry
SOD_c12790 CDS
T02710
Name
(GenBank) RIO-like kinase
KO
K07178
RIO kinase 1 [EC:
2.7.11.1
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SOD_c12790
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
srl01001
]
SOD_c12790
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
srl03009
]
SOD_c12790
Enzymes [BR:
srl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
SOD_c12790
Protein kinases [BR:
srl01001
]
Serine/threonine kinases: Other
RIO family [OT]
SOD_c12790
Ribosome biogenesis [BR:
srl03009
]
Eukaryotic type
Pre-40S particles
Kinases
SOD_c12790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIO1
APH
YrbL-PhoP_reg
TCAD9
Motif
Other DBs
NCBI-ProteinID:
AGO54264
LinkDB
All DBs
Position
complement(1397691..1398539)
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AA seq
282 aa
AA seq
DB search
MKIPKRLQPLVDDGLIDDVIRRLKSGKEADVFIVRCGEEIRCAKVYKEADKRNFKQAVNY
QEGRKVRNSRDARAMSKGSKFGRQQQEEAWQNTEVDALYLLAKAGVRVPQPDICLDGVLL
MELITDEEGLVAPRLSDVSLTQEQALADHAVMMNYAVRMLCAGLVHGDLSEFNVLMDKNG
PVIIDLPQVVDAAANNHAKSMFERDINNMSNFYGQYAPELLNSKYAKEIWALYQEGNLTP
ESVLTGKFVESSKRADVGSVLEEIQAASEEHQRQLMARNEED
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattccaaaacgactccagccattggtagatgatggtttaatcgacgacgtcatc
cgccgtttaaagagtggcaaagaagccgacgtctttatcgtgcgttgcggcgaagagatc
cgctgcgccaaagtctacaaagaagcagacaaacgtaacttcaagcaggccgtcaattat
caggaaggccgtaaagtgcgtaacagccgcgatgcccgcgccatgagcaaaggttccaaa
ttcggccgccagcagcaggaagaagcctggcagaataccgaggtcgatgcgctgtacctg
ctcgccaaagcgggcgtgcgcgtgcctcagccggatatttgcctggatggcgtgctgttg
atggagctgattaccgacgaagaaggcctggttgcgccgcgcctgagcgatgtgagcctg
acgcaggaacaagcgttggccgatcacgcggtgatgatgaactacgcggtgcgtatgttg
tgcgccgggctggtgcatggcgatctgtcggagttcaacgtgctgatggacaaaaatggg
ccggtgattatcgatctgccgcaggtggtggacgccgccgccaacaatcacgcaaaaagc
atgttcgagcgcgatatcaacaatatgtcgaatttttacggtcaatacgcgccggaactg
ctcaacagtaaatatgccaaagagatctgggcgctgtatcaggaaggcaatctgacgccg
gaaagcgtgctgaccgggaagttcgtggaaagcagcaagcgcgccgatgtcggttcagta
ctggaagagattcaggcagccagcgaagaacaccagcgccagctgatggcccgcaacgaa
gaagattaa
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