Serratia plymuthica 4Rx13: SOD_c12840
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Entry
SOD_c12840 CDS
T02710
Symbol
ycfQ1
Name
(GenBank) putative HTH-type transcriptional regulator YcfQ
KO
K22041
TetR/AcrR family transcriptional regulator, copper-responsive repressor
Organism
srl
Serratia plymuthica 4Rx13
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srl03000
]
SOD_c12840 (ycfQ1)
Transcription factors [BR:
srl03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
SOD_c12840 (ycfQ1)
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Ortholog
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GFIT
Motif
Pfam:
TetR_N
TetR_C_13
TetR_C_13_2
TetR_C_17
TetR_C_11
Motif
Other DBs
NCBI-ProteinID:
AGO54269
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Position
1402259..1402903
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AA seq
214 aa
AA seq
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MSINEEVCAKKTRGRPKQFDRDRALESALDLFWRHGYESTSLADLVEVTGAKAPTLYAEF
GNKEGLFRAAVERYLQKYTTCTNQLLEQDLPIAEIVEAYVRSSAQVFTDPDTPSGCFMVC
ASAALSSSSDEVAMMLRKKHHSQETSLKACFDRKVQQGELLAKTDTGLLAKYIICTIEGM
SVQAREGASREDLFRLLDALMLVWPRLSQVGNKV
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcaatgaagaagtctgcgccaaaaaaacgcgtggcagaccgaagcagtttgat
cgcgaccgtgcgttggaaagcgcactcgatctgttctggcggcacggttatgagtcaacg
tcgctggccgatctggttgaggtgaccggtgccaaggcgccaacgctgtatgccgagttc
ggcaacaaggaagggctgttccgcgctgcggtggaacgttacctgcaaaaatacaccacc
tgcaccaaccaactgttggagcaggacctgccgattgcggaaatcgtagaagcttacgtc
cgctcttcagcgcaggtgtttaccgatccggatacgccgtccggttgctttatggtgtgt
gcgtccgccgcgctgtcatcttcttctgacgaagtcgccatgatgctgcgtaaaaaacac
cattcgcaggaaaccagcctgaaggcctgcttcgaccgtaaagtgcagcagggcgagttg
ttggcaaaaaccgacaccgggttactggcgaagtacattatttgcaccattgaaggcatg
tcggtgcaggcgcgtgaaggagcaagccgcgaggatttgttccgtctgcttgatgcgctg
atgctggtttggccgcgtctcagccaggtggggaataaggtctag
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