Serratia plymuthica 4Rx13: SOD_c16180
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Entry
SOD_c16180 CDS
T02710
Symbol
ompA
Name
(GenBank) outer membrane protein A
KO
K03286
OmpA-OmpF porin, OOP family
Organism
srl
Serratia plymuthica 4Rx13
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srl02000
]
SOD_c16180 (ompA)
Transporters [BR:
srl02000
]
Other transporters
Pores ion channels [TC:
1
]
SOD_c16180 (ompA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OmpA
OMP_b-brl
DUF2490
Pilus_CpaD
Phage_T7_tail
Motif
Other DBs
NCBI-ProteinID:
AGO54603
LinkDB
All DBs
Position
complement(1784881..1785960)
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AA seq
359 aa
AA seq
DB search
MKKTAIALAVALAGFATVAQAAPKDNTWYTGAKLGWSQYHDTGFYGNGYQNGIGNGPNHK
DQLGAGAFLGYQANQYLGFELGYDWLGRMPYKGSVNNGAFKAQGVQLAAKLSYPIADDLD
IYTRLGGMVWRADSKANYGNGTRLSDHDTGVSPLAAVGVEYALTKNWATRLDYQFVSNIG
DAGTVGARPDNTMLSLGVSYRFGQDDVVAPVAPAPAPAPVVETKRFTLKSDVLFNFNKAT
LKPQGQQALDQLYSQLSSMDPKDGSVVVLGYTDAVGSDQYNQKLSEKRAQSVVDYLVSKG
IPSDKISARGMGEADSVTGNTCGYKAGRATKAQIACLAPDRRVEIEVKGIKDVVTQPQG
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagacagctatcgcattagcagtggcactggctggtttcgctaccgtagcgcaa
gccgccccaaaagataatacctggtacaccggtgctaaactgggctggtcccagtaccat
gacactggtttctacggcaacggttaccagaatggtatcggcaatggtccgaaccataaa
gatcaactgggtgctggcgcgttcctgggttaccaggcgaaccaatacctgggcttcgag
ctgggctatgactggcttggccgtatgccttacaaaggcagcgtgaacaacggtgctttc
aaagcacagggcgttcaactggcagctaaactgagctacccaattgctgacgatctggat
atctacactcgtctgggtggtatggtatggcgtgcagactccaaagctaactacggcaat
ggcactcgtctgagcgaccacgacaccggcgtttctccgctggctgcagtgggtgttgaa
tacgcactgaccaaaaactgggctactcgcctggactatcagttcgttagcaacatcggt
gatgcaggtactgtcggcgcacgtccagacaacaccatgctgagcctgggtgtttcttac
cgtttcggtcaggatgatgttgttgctccagttgctccagcaccagctccggctccagtt
gttgaaaccaagcgtttcactctgaagtctgacgtgctgttcaacttcaacaaagcaact
ctgaagccacagggccaacaggctctggaccagctgtactctcagctgagctccatggat
cctaaagacggttctgttgtagttctgggttacaccgacgcagttggttctgaccagtac
aaccagaaactgtctgaaaaacgcgcacaaagcgttgttgattacctggtctctaaaggt
atcccttcagacaaaatctctgcacgtggtatgggcgaagctgactccgtcactggcaac
acctgtggctacaaagctggccgtgctactaaagcgcagatcgcttgcctggcaccagat
cgtcgcgtagagatcgaagttaaaggcatcaaagacgttgtgactcagccacagggctaa
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