Serratia plymuthica 4Rx13: SOD_c17050
Help
Entry
SOD_c17050 CDS
T02710
Symbol
bigR
Name
(GenBank) biofilm growth-associated repressor
KO
K22042
ArsR family transcriptional regulator, virulence genes transcriptional regulator
Organism
srl
Serratia plymuthica 4Rx13
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srl03000
]
SOD_c17050 (bigR)
Transcription factors [BR:
srl03000
]
Prokaryotic type
Helix-turn-helix
ArsR family
SOD_c17050 (bigR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_5
HTH_20
HTH_Crp_2
MarR_2
TrmB
Rrf2
Fe_dep_repress
HxlR
HTH_IclR
MarR
TFIIE_alpha
HTH_24
Cas_Csy1
PaaX
HTH_10
HTH_1
GntR
DUF7343
DUF7346
HTH_Cmi2_C
HTH_PafC
MerR_1
Arg_repressor
HTH_11
HTH_27
Penicillinase_R
CENP-B_N
ANT
DUF3871
DUF7344
IF2_N
Motif
Other DBs
NCBI-ProteinID:
AGO54684
LinkDB
All DBs
Position
1870952..1871263
Genome browser
AA seq
103 aa
AA seq
DB search
MNIDSMRQAATQAGALLRALGNEDRLLLLCQLSQREMSVGELAQTLGIRQPTLSQQLSVL
RQEGLVSTRREGKQIYYAVSDEKALTILSTLYQLYCPAPGATP
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgacagtatgcggcaggcggcaacgcaggctggggcgctgttgcgggcgctg
ggcaacgaggatcgcttgctgctgctatgccaacttagccagcgtgagatgtcggtcggt
gaactggcgcagacgctggggatccgtcagccgacgctttcccagcaattgagcgtattg
cggcaggaagggctggtgtcaacgcgacgcgagggcaagcagatttactatgccgtcagc
gatgaaaaagcgctgacgatcctcagcaccttgtatcaactttattgcccggcaccggga
gcgacaccatga
DBGET
integrated database retrieval system
