Serratia plymuthica 4Rx13: SOD_c18570
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Entry
SOD_c18570 CDS
T02710
Symbol
icd
Name
(GenBank) isocitrate dehydrogenase [NADp] Icd
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl00020
Citrate cycle (TCA cycle)
srl00480
Glutathione metabolism
srl00720
Other carbon fixation pathways
srl01100
Metabolic pathways
srl01110
Biosynthesis of secondary metabolites
srl01120
Microbial metabolism in diverse environments
srl01200
Carbon metabolism
srl01210
2-Oxocarboxylic acid metabolism
srl01230
Biosynthesis of amino acids
srl04146
Peroxisome
Module
srl_M00009
Citrate cycle (TCA cycle, Krebs cycle)
srl_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SOD_c18570 (icd)
09102 Energy metabolism
00720 Other carbon fixation pathways
SOD_c18570 (icd)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
SOD_c18570 (icd)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SOD_c18570 (icd)
Enzymes [BR:
srl01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
SOD_c18570 (icd)
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GFIT
Motif
Pfam:
Iso_dh
tRNA_synt_1c_R1
Motif
Other DBs
NCBI-ProteinID:
AGO54834
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All DBs
Position
2021905..2023158
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AA seq
417 aa
AA seq
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MESKVVVPAEGKQITVDAQGKLVVPNNPIIPFIEGDGIGVDVTPAMIHVVDAAVKKAYHG
ERKISWMEIYTGEKSTHVYGKDVWLPEETLDLIRDYRVAIKGPLTTPVGGGIRSLNVALR
QQLDLYVCLRPVRYYQGTPSPVKQPELTDMVIFRENAEDIYAGIEWKAGSAEADKVIKFL
RDEMGVKKIRFPEQCGIGVKPCSEEGTKRLVRAAIEYAITNDRDSVTLVHKGNIMKFTEG
AFKDWGYELAREEFGGELIDGGPWLKIKNPNTGKEIVVKDVIADAFLQQILLRPAEYDVI
ACMNLNGDYISDALAAQVGGIGIAPGANIGSDCALFEATHGTAPKYAGQDKVNPGSIILS
AEMMLRHMGWFEAADLIVKGMEGAIAAKTVTYDFERLMEGAKLLKCSEFGDAIVKHM
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcaaagtagttgttccggcagaaggtaaacagattacggtcgatgcccagggt
aaactggttgttccgaataacccgatcatcccgttcatcgaaggcgacggcattggcgtt
gacgttacccctgctatgattcacgtggttgatgcggctgtgaaaaaggcctaccacggc
gaacgtaaaatctcctggatggaaatctacaccggtgaaaaatccactcacgtttacggg
aaagacgtgtggctgccggaagaaaccctggatctgatccgtgactaccgcgttgccatc
aaaggcccgctgactaccccggtcggtggcggtattcgctccctgaacgtggctctgcgc
cagcaactggacctgtacgtgtgtctgcgtccggtgcgttactaccagggcacccctagc
ccggttaaacagccagagctgaccgacatggtgatcttccgcgaaaacgccgaagacatc
tatgcgggtatcgaatggaaagccggttctgccgaagcggacaaagtgatcaagttcctg
cgcgacgaaatgggcgtgaagaaaatccgcttcccggaacaatgcggtatcggcgtcaag
ccatgttccgaagaagggaccaaacgtctggtgcgtgcggcgatcgaatacgccatcacc
aacgaccgtgactctgtgaccctggttcacaaaggcaacatcatgaagttcaccgaaggt
gccttcaaggattggggctacgaactggcgcgcgaagagttcggcggcgaattgatcgac
ggcggcccgtggctgaaaatcaagaacccgaacaccggtaaagagatcgtggttaaagac
gtgatcgccgacgccttcctgcagcaaatcctgctgcgcccggcggaatacgacgtaatc
gcctgtatgaacctgaacggtgactacatctccgacgccctggccgcacaggttggcggt
atcggtatcgcacctggtgccaacatcggttccgattgcgcgctgttcgaagcgacccac
ggcaccgcacctaagtatgccggccaggacaaagtgaacccaggttccatcatcctgtcc
gcagaaatgatgctgcgtcacatgggctggttcgaagcggctgacctgatcgttaaaggc
atggaaggcgcaatcgctgccaagaccgtgacctatgacttcgaacgcctgatggaaggc
gctaaactactgaaatgttcagagtttggcgacgctatcgttaagcacatgtag
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