Serratia plymuthica 4Rx13: SOD_c19360
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Entry
SOD_c19360 CDS
T02710
Symbol
kdgR
Name
(GenBank) pectin degradation repressor protein KdgR
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
srl
Serratia plymuthica 4Rx13
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srl03000
]
SOD_c19360 (kdgR)
Transcription factors [BR:
srl03000
]
Prokaryotic type
Helix-turn-helix
IclR family
SOD_c19360 (kdgR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
HTH_24
HVO_A0261_N
HTH_5
TrmB
HTH_11
MarR_2
Rrf2
Fe_dep_repress
HTH_45
HVO_A0114
FUR
MarR
HTH_34
Mga
HTH_26
PadR
HTH_6
Dimerisation2-like_dom
TSCPD
Motif
Other DBs
NCBI-ProteinID:
AGO54913
LinkDB
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Position
2107930..2108721
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AA seq
263 aa
AA seq
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MANADLDKQPDSVSSVLKVFGILQALGDEREIGITELSQRVMMSKSTVYRFLQTMKSLGY
VSQEGESEKYALTLKLFELGAKSLQNVDLIRSADIQMRELSNHTRETIHLGALDEDSIVY
IHKIDSMYNLQMYSRIGRRNPLHSTAIGKVLLAWRERAEVEKILSQIELTRSTPHTLTSP
AALLSLLEQVREHGVGEDIEEQEEGLRCIAVPVFDRFGVVIAGLSISFPTIRFSEKAKAD
YVKRLHAAARNISDQMGYHDYPF
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggctaacgcagatttagataaacaaccggattctgtttcatcagtgctgaaagtgttt
ggtatcttgcaagcgctgggcgatgagcgcgagatcggcattactgagctttctcaacgg
gtgatgatgtccaaaagcaccgtatatcgttttctgcagaccatgaagtcgctgggctat
gtgtcgcaggaaggggaatcggaaaaatatgcgcttactctcaagctgtttgaactcggt
gccaagtcgctgcagaacgtcgatctgatccgcagcgccgatattcagatgcgcgagttg
tcgaatcacacccgtgaaaccattcacctcggggcgctggatgaagacagtattgtctac
atccataaaatcgactcgatgtacaacctgcagatgtattcgcgcatcggtcgccgtaat
ccgctgcacagcaccgccatcggtaaagtgctgctggcctggcgagagcgtgcggaagtg
gaaaaaatcctgtcgcagattgagcttacccgcagtaccccgcacaccctcaccagcccc
gctgcgctgctgtcgctattggagcaggtacgcgagcacggggtgggcgaagacattgaa
gagcaggaagaagggctgcgctgcattgcggtgccggtattcgatcgctttggcgtggtg
atcgccgggcttagcatttcgttccccactatccgtttctccgagaaggccaaggcggat
tacgttaaacgcctgcatgctgccgcacgtaacatttccgatcaaatgggctaccacgat
tatcccttttga
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