Serratia plymuthica 4Rx13: SOD_c19680
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Entry
SOD_c19680 CDS
T02710
Symbol
arnB
Name
(GenBank) UDp-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase ArnB
KO
K07806
UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:
2.6.1.87
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl00541
Biosynthesis of various nucleotide sugars
srl01100
Metabolic pathways
srl01250
Biosynthesis of nucleotide sugars
srl01503
Cationic antimicrobial peptide (CAMP) resistance
srl02020
Two-component system
Module
srl_M00761
Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SOD_c19680 (arnB)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SOD_c19680 (arnB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
SOD_c19680 (arnB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
srl01007
]
SOD_c19680 (arnB)
Enzymes [BR:
srl01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.87 UDP-4-amino-4-deoxy-L-arabinose aminotransferase
SOD_c19680 (arnB)
Amino acid related enzymes [BR:
srl01007
]
Aminotransferase (transaminase)
Others
SOD_c19680 (arnB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
SepSecS
OKR_DC_1
PaaX_M
Motif
Other DBs
NCBI-ProteinID:
AGO54945
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All DBs
Position
2140363..2141517
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AA seq
384 aa
AA seq
DB search
MDEFLPFSRPAIGDEEIAAVEKVLRSGWITTGPQNQQLENEFCSTFGCKHAIAVCSATAG
MHITLMALGIGPGDEVITPSQTWVSTLNMIELLGATPVMIDVDRDTLMVSAADVEAAITA
KTKAIVPVHYAGAPLQMDALRDVATRHNLPLIEDAAHAVGTRYNGEWVGARGTAIFSFHA
IKNLTCAEGGLIATDDDALADRVRCLKFHGLAVDAFDRQQLGRKPQAEVVEPGYKYNLSD
IHAAIAVVQLARLPQLNARRKALAQRYLAALEGSPFQPLGLPDYPHDHAWHLFMVRVDAE
RCGIDRDQLMERLKALGIGTGLHFRAAHTQKFYRERYPQLSLPNTEWNSARLCTLPLFPD
MTDGDVDRVVNALSSVVESLRVSR
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggatgaatttttacctttttctcgcccggccattggcgatgaagagatcgcagcggta
gaaaaggtattgcgctccggctggatcaccaccggcccgcagaatcagcaattggaaaac
gaattctgctccaccttcggatgtaaacacgccatagccgtttgttccgccactgcgggc
atgcacatcaccctgatggcgctgggcattggcccgggtgatgaggttatcacgccctcg
caaacctgggtttccaccctcaatatgattgaattgcttggcgcgacgccggtgatgatt
gatgttgatcgcgatacgctgatggtcagtgccgccgatgtcgaagcggccattacggct
aaaaccaaagccattgtcccggttcattacgccggtgcgccgctgcagatggacgctttg
cgcgatgtggcaacgcgccacaacctccctctgatcgaagacgctgcccatgcggtgggt
acccgttacaacggcgagtgggtcggcgcacgcggcacggcaattttttccttccatgcg
attaaaaacctgacctgtgccgaggggggcctgattgccaccgacgacgatgcgctggcc
gatcgcgtacgttgcctgaagttccacggactggcggttgacgccttcgatcgccaacaa
ctggggcgcaagccgcaggcagaggtggtggaaccgggctacaaatacaacctttcggat
attcacgcggccatagcggtcgtgcagttagctcgtctgccgcagttgaacgcccgtcgc
aaagcgttggcccaacgttatttggccgcgctggaaggttcgcctttccagccgttgggg
ttgcctgattacccgcatgatcacgcctggcatctgtttatggtgcgcgttgatgccgaa
cgttgcggcatcgatcgcgaccaactgatggagcgcctgaaagcgttgggcatcggtacc
ggcctgcatttccgcgctgcccatacccagaaattctaccgcgaacgttatccgcagctg
tcgttgccgaacaccgaatggaactcggcgcgtctgtgcaccttaccgttattccctgat
atgaccgacggcgatgttgatcgcgtggtcaatgccttatcttctgttgtggagtcgtta
cgtgtctcgcgttga
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