Serratia plymuthica 4Rx13: SOD_c20220
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Entry
SOD_c20220 CDS
T02710
Symbol
aaeR1
Name
(GenBank) HTH-type transcriptional activator AaeR
KO
K21698
LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
Organism
srl
Serratia plymuthica 4Rx13
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srl03000
]
SOD_c20220 (aaeR1)
Transcription factors [BR:
srl03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SOD_c20220 (aaeR1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_24
HTH_5
HTH_20
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AGO54996
LinkDB
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Position
2197540..2198451
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AA seq
303 aa
AA seq
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MAVFAIVVAEGSLAGAARRLGMTPSAVSQHMRSLEKALGVPLLHRSTRRLALTEAGAAFY
PGCEAMLSQAQQAEQRLAELRDTLVGELRIATTVGIGGRPLAEALAPLLQAHPKLTLRVL
ADDRIVDMIEQRIDIALRVNRQLADASMIAHPLAEWPMVLCAAPRYLSQHGVPETPQDLV
AHRWISGIHSGAHLDLHHQSGQQLKLRLAEGQIVSDSMTVMRGFTRSGLGISVQPLYEIE
DELQRGELILLLPEWRPVPLRLHALTLERAMPEKNRQALRYLRDYFRRHTEKSLASGANG
VFN
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggcggtattcgccatcgtggtggccgaagggtcgctggccggtgccgcacggcggttg
ggcatgacaccgtcggcggtcagccagcacatgcgttcgctggaaaaagcgctcggcgtg
ccgttgttgcaccgctccacgcggcgattggcgctcaccgaagcgggggcagcgttctat
cctggctgcgaggcgatgttgtcccaagcgcagcaggcggaacaacggctggcggaattg
cgcgacaccctggtgggtgaactgcgtatcgccaccacagtcggtattggcgggcgccca
ctggcggaggcgttggcgccgctgttgcaggcgcaccctaaactgacgctgcgcgtactg
gcggatgaccggatcgtcgacatgatcgagcagcggatcgatatcgcgctgcgggtcaac
cgtcagttggcggatgccagtatgatcgcccacccgctggccgagtggccgatggtgctt
tgcgccgcgccgcgttatctcagccagcacggggtgccggagacaccgcaggatttggtg
gcgcaccgttggatctccggcattcacagcggcgcacatctggatttgcaccatcaaagt
gggcagcagctcaaattaaggctggcggaggggcagatcgtcagcgacagcatgaccgtc
atgcgcggctttacccgcagtggcctggggatctcggtgcagccgctgtatgaaattgag
gatgaattgcagcgcggtgaacttatcctgctgttgcccgaatggcggcctgtgccgcta
cggctgcatgcgctgacgctggaaagggcgatgccggaaaaaaatcggcaggcgttgcgc
tatttacgcgactattttcgccgccataccgaaaagtcacttgccagcggcgccaatggc
gtcttcaattag
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