Serratia plymuthica 4Rx13: SOD_c21730
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Entry
SOD_c21730 CDS
T02710
Symbol
ddpC1
Name
(GenBank) putative D,D-dipeptide transport system permease protein DdpC
KO
K02034
peptide/nickel transport system permease protein
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SOD_c21730 (ddpC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srl02000
]
SOD_c21730 (ddpC1)
Transporters [BR:
srl02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
SOD_c21730 (ddpC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
OppC_N
DUF6535
Motif
Other DBs
NCBI-ProteinID:
AGO55147
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All DBs
Position
2369546..2370481
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AA seq
311 aa
AA seq
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MTMSQLEQPSSQLEPPPSQIEPPPAAEPALRFVGARRAWYRVRRSPLTLLGGAIMFCVLF
LMLFSPWLAPHNPDAIDLAARLLPPSAEHWFGTDEVGRDLFSRVLVGSRQSVAAGLAVVV
LAGGIGSLLGCFSGVMGGTVDALIMRCMDIMLSVPSLVLTMALAAALGPSLFNAMLAIAV
VRIPFYVRLARGQTLTLRHQAYMQAARTFGASRWHLIGWHVLRNVMPPLVVQASLDIGTA
ILMAATLGFIGLGAQQPTAEWGAMVANGRNYVLDQWWYSAFPGTAILITATGFNLFGDGL
RDLLDPKTRGR
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgactatgtctcaacttgaacaaccgtcgtctcaacttgaaccaccgccgtctcaaatc
gagccaccgccggcggcggaacctgcgctgcgctttgtcggcgcgcggcgcgcctggtat
cgggtgcggcgcagcccgctgacgctgttgggtggcgccatcatgttctgcgtgctgttt
ttgatgctgttttccccctggctggcgccgcacaatccggacgccatcgacctggccgcg
cggctgctgccgccttcggccgaacactggttcggcaccgacgaagtaggccgcgacctg
ttcagccgggtgctggtcggcagccggcagtcggttgccgccgggctggcggtggtggtg
ctggcgggcggaattggctcgctgctcggctgtttctccggcgtgatgggcggcacggtg
gatgcgttgatcatgcgctgcatggacatcatgctgtcggtgccttcgctggtgctgacc
atggcgctggcggccgcgcttgggccaagcctgttcaacgccatgctggcgattgcggtg
gtgcgcattccgttttacgtgcggttggcgcgcgggcagacgctgacgctgcggcatcag
gcttatatgcaggcggctcgcacctttggcgcttcgcgctggcatttgattggctggcat
gtcctgcgcaatgtcatgccgccgttggtggtacaggcgtcgctggatatcggtaccgcc
atcctgatggccgccacgctgggctttatcggccttggcgcccaacaaccgaccgccgaa
tggggcgccatggtggccaacggccgtaactatgtgctcgaccagtggtggtattcggcc
tttcccggtacggcgatcctgatcaccgccaccggtttcaacctgttcggcgacggtctg
cgcgacttgctggatcctaaaacccgggggcgttga
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