Serratia plymuthica 4Rx13: SOD_c23780
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Entry
SOD_c23780 CDS
T02710
Name
(GenBank) hypothetical protein
KO
K10439
ribose transport system substrate-binding protein
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl02010
ABC transporters
srl02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SOD_c23780
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
SOD_c23780
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srl02000
]
SOD_c23780
Transporters [BR:
srl02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
SOD_c23780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Peripla_BP_6
Gly_transporter
RNase_Zc3h12a
Motif
Other DBs
NCBI-ProteinID:
AGO55352
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Position
complement(2663870..2664865)
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AA seq
331 aa
AA seq
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MNNRVITEMTKKLIKITALALSVFAAHGAQAALSLQGKTIGVAVVGTQHFWDREAFKGAS
DEVEHLGGKVVAVDGGRDNQVHADNHDILLARKVDAVISILGDSAVEPKFKALRAAGIPV
FTVDHVSSYSINNTTSDNYSIGSTIGRYTAEALGGKGNVAVFNAFSNSLRICGIRYDLWK
YVLKDYPDIKIIQPELAEQYANSPEDARKKTLELLSQHPKGTLDAIHVACWDQPAIGIVQ
ALEESGRAGDVKVTAIDAGPETLEIMAEKGSPLVANVAQQPRLIGTTSADNVARYFAGEK
LQPQTFVPVLPVKGPEEAKAVYKQLGYGELK
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaataacagggtaataacagaaatgacaaaaaaacttattaaaatcacagcgctggca
ctgtcagttttcgctgctcacggcgcccaggcggcgctttcattgcaggggaaaaccatt
ggcgtggcggtggtcggcacgcagcacttttgggatcgcgaagcgttcaaaggcgccagc
gacgaagtggaacatctgggtggcaaagtggtggcggtcgatggcggccgcgataaccag
gtacatgccgacaatcacgatatcctgctggcgcgcaaggtggatgcggtgatcagcatt
ttgggcgacagcgccgtcgagcctaaattcaaagcgttgcgcgccgccgggatcccggta
ttcaccgtcgaccatgtatcgtcgtattccatcaacaacaccacctcggacaactacagc
atcggcagcaccattggccgctataccgccgaggcgctgggcggcaaaggcaatgtggcg
gtgttcaacgccttctccaactcactgcgtatctgcggcattcgctacgatctgtggaaa
tacgtgttgaaagattacccggacatcaaaatcattcaaccggagctggccgagcaatac
gccaattcgccggaagatgcgcgcaagaaaaccctcgaactgttaagccagcatccgaaa
ggcacgctggacgcaattcacgtcgcctgctgggaccagccggcgatcggtatcgtgcag
gcgctggaagagagcggccgcgccggcgacgttaaggtcacggcgatcgacgccgggccg
gaaaccctggaaatcatggcggaaaagggcagcccgctggttgccaacgtggcgcaacag
ccgcggttaatcggcaccacttcagcggataacgtggcgcgttatttcgccggcgagaag
ttgcaaccgcaaacctttgtgccggtattgccggtgaaagggccggaagaggcgaaggcg
gtgtacaaacagctcggctacggcgagctgaaataa
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