Serratia plymuthica 4Rx13: SOD_c24990
Help
Entry
SOD_c24990 CDS
T02710
Symbol
pyrF
Name
(GenBank) orotidine 5'-phosphate decarboxylase PyrF
KO
K01591
orotidine-5'-phosphate decarboxylase [EC:
4.1.1.23
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl00240
Pyrimidine metabolism
srl01100
Metabolic pathways
srl01240
Biosynthesis of cofactors
Module
srl_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
SOD_c24990 (pyrF)
Enzymes [BR:
srl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.23 orotidine-5'-phosphate decarboxylase
SOD_c24990 (pyrF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OMPdecase
Motif
Other DBs
NCBI-ProteinID:
AGO55473
LinkDB
All DBs
Position
complement(2807778..2808533)
Genome browser
AA seq
251 aa
AA seq
DB search
MSILKKVEEMKSENNINNNDLKSSPIIVALDYADIGAALAFVDRINPQDCRLKVGKEMFT
LFGPQLVRDLHDRGFDVFLDLKFHDIPNTTAHAVAAAAELGVWMVNVHASGGARMMTAAK
EALLPYGAEAPLLIAVTVLTSMEAEDLQAIGIDISPAEQAERLARLTRECGLDGVVCSAH
EAERLKAVCGRQFQLVTPGIRPEGSAAGDQRRIMTPVQAQAAGVDYMVIGRPITQSADPA
ATLSAIRASLA
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgtccattttaaagaaggtagaagaaatgaagtctgaaaataacatcaataacaatgac
ttaaaatcatctccaatcatcgttgcgttggattacgcagatattggcgccgcattggcg
tttgtcgatcgcattaatccacaggactgccggttaaaagtgggcaaagaaatgttcacc
ctgtttgggccgcaattggtgcgtgatttgcacgatcgtggcttcgacgtattcctggat
ttaaaattccacgatatccccaataccacggcccatgcggtagcggccgcggccgaactg
ggcgtatggatggttaacgtccatgccagcggcggcgcacgtatgatgaccgcggctaaa
gaagcgttgctgccttatggcgcagaggcgccactgttgatcgccgttaccgttcttacc
agtatggaggcggaggatctgcaagctatcggcatcgacatttccccggctgagcaggct
gagcggctggcgcgtttgactcgtgagtgcgggctggacggcgttgtctgttcggcgcat
gaagctgaacggctgaaagcggtctgcgggcgtcagttccaactggtcacgccaggcatt
cgtccagagggcagcgcagccggcgatcagcgccgtattatgacgccggtgcaggcgcag
gccgccggggtagattatatggtgattgggcgtccgatcacccaatccgccgatcctgcc
gctacgctgagcgctattcgcgcttccctggcctga
DBGET
integrated database retrieval system
