Serratia plymuthica 4Rx13: SOD_c25130
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Entry
SOD_c25130 CDS
T02710
Symbol
rluB
Name
(GenBank) ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
srl
Serratia plymuthica 4Rx13
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
srl03009
]
SOD_c25130 (rluB)
Enzymes [BR:
srl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
SOD_c25130 (rluB)
Ribosome biogenesis [BR:
srl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SOD_c25130 (rluB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AGO55487
LinkDB
All DBs
Position
complement(2824785..2825681)
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AA seq
298 aa
AA seq
DB search
MSEKLQKVLARAGHGSRREIETIIEAGRVSVDGKVAKLGDRVEVTASMKIRLDGHVLSIK
ESEETVCRVLAYYKPEGELCTRSDPEGRPTVFDRLPKLRGSRWVAVGRLDVNTSGLLLFT
TDGELANRLMHPSREVEREYAVRVFGQIDDEKVKQLSKGVQLEDGPAAFRTITFQGGEGI
NQWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDIDLPKGLPRGGWTELELPAINYL
RELVELKPETVSKMPVERERRRVKANQIRRAVKRHTQVAGSGRRSAPGSKSGKPSKRS
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaagttacaaaaagttttagcgcgcgccggccatggctcgcgtcgtgaaatc
gaaaccataattgaagccggccgcgtcagcgttgacggtaaagtcgccaaactgggcgac
cgcgttgaagtgactgcctcgatgaaaattcgtctggatggtcacgtactttcaattaaa
gaatccgaagaaacggtttgccgcgtgctggcttattacaagccggaaggtgaactctgt
acccgtagcgatcctgaaggccgtccgacggtgttcgatcgcctgcctaagctgcgtggc
tctcgctgggtagcggtggggcgtctggacgtcaatacatcgggcctgctgctgttcacc
accgacggtgagttggcaaaccgcctgatgcaccctagccgtgaagtcgagcgcgaatac
gcggtacgtgtatttggccagattgacgatgaaaaagtgaagcaattgagcaagggcgtt
cagttggaagatggccctgccgccttccgcaccatcactttccagggcggcgaaggcatt
aaccaatggtacaacgtgaccctgactgaagggcgtaaccgtgaggtgcgtcgtctttgg
gaagcggttggcgtgcaggtcagccgcctgatccgcgtacgttatggcgatatcgatctg
cctaaaggcctgccgcgtggcggttggaccgagctggaactgccggcgattaactatctg
cgcgaattggttgagctgaagcccgaaacggtcagcaagatgccggtggagcgtgagcgt
cgccgcgtgaaagcgaatcagatccgtcgtgcggtcaaacgccatacccaggtggcgggc
agtggccgccgcagcgcgccaggcagcaagtccggcaaaccaagcaagcgcagctaa
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