Serratia plymuthica 4Rx13: SOD_c28270
Help
Entry
SOD_c28270 CDS
T02710
Name
(GenBank) hypothetical protein
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
srl
Serratia plymuthica 4Rx13
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srl03000
]
SOD_c28270
Transcription factors [BR:
srl03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SOD_c28270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LacI
HTH_Tnp_ISL3
Peripla_BP_1
HTH_3
HTH_6
Peripla_BP_4
HTH_26
HTH_38
FANCI_S2
HTH_31
Sigma54_DBD
HTH_10
Trp_repressor
HTH_7
HTH_IclR
HTH_AsnC-type
MerR
TetR_N
Motif
Other DBs
NCBI-ProteinID:
AGO55800
LinkDB
All DBs
Position
complement(3165140..3165820)
Genome browser
AA seq
226 aa
AA seq
DB search
MNWLAFSTPVTLYSEFHCKGDALIIMASIKDVAKKAGVSTATVSRVLNNHPSVVAETRKA
VRDAMDYLCYVPSKSAFQLSGKCSGLIGVVLPNLVNPHFCELLATFEEEARYIGKSVIVK
THQNQPQQDKQIIHTLVGMGIDSLLWVPTEVEAELSEWLTITNIPVAVVTQVSRFLTPYQ
LTKVKARKALRNISCKRGIPHWVLLLRKVSIIEKCLPTVKKSAAMV
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
gtgaactggcttgcattttcaactcccgtcacactttatagtgagttccattgtaaggga
gacgcattaatcatcatggcatccattaaagacgtagcaaaaaaagccggggtctctacc
gccaccgtatcgcgggttttaaataaccaccccagcgtagtggcggaaacacgcaaggcg
gtgcgtgatgcgatggattatctttgttatgtgccaagcaagagtgctttccaacttagc
ggcaaatgctccgggttgattggcgtggtattgcctaatctggttaaccctcacttctgt
gagctgctggcgacatttgaagaagaggccagatacattggtaagtcggttatcgttaaa
acgcatcagaatcaaccgcagcaggataagcaaattatccataccttggtcggcatgggg
atcgacagcctgctgtgggtaccgacagaagtggaggctgaactctctgagtggttaacg
atcaccaacattccggtggcagtcgtaacgcaggtttcccgttttttaactccgtatcaa
ttaaccaaggtaaaggcgcggaaagcattgcggaacatttcatgcaaacggggcatacct
cattgggttttgttgctcaggaaggtgtcgataatcgaaaagtgtcttcctacagtaaaa
aaatcagcagccatggtctga
DBGET
integrated database retrieval system
