Serratia plymuthica 4Rx13: SOD_c28360
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Entry
SOD_c28360 CDS
T02710
Symbol
nodV
Name
(GenBank) nodulation protein V
Organism
srl
Serratia plymuthica 4Rx13
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_16
Pkinase
HATPase_c
PK_Tyr_Ser-Thr
PAS_3
GAF
HisKA
GAF_2
AAA_22
GAF_3
HATPase_c_5
ABC1
Kinase-like
RsgA_GTPase
nSTAND1
ATPase_2
Kdo
KAP_NTPase
Motif
Other DBs
NCBI-ProteinID:
AGO55809
LinkDB
All DBs
Position
3174421..3180027
Genome browser
AA seq
1868 aa
AA seq
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MNDPLIPPDRAALPDFQDGQFFAFKDDVIFTPLVQEGCIVWMNGRHPFSNGAFILATAVS
DEAEADATRLLKNEFILRPYLSDAWAVKPAACTQYRGRYALVYPSFAFDSLARITGQPMA
CIASFLELAIRICAPLRQMHRHNLIHGDIKPGNIFIQEDASCRLAGFGLTTGTAEELKQT
RLPFFGGTLAYMSPEHTSRTQRSVDSRSDLYSLGIVFYELLTGSLPFDLSEGGLEEWTHH
HIASEPRPPHLLREQVPAMLSTLVLRLLAKSPDNRYQTVDGLVADLRRCQATLTSDNDIM
PFPPGLQDRAPEFHLADTLYTPHPQGRELIAAFDKVNQSGTHALAVINGPSGIGKSSLIA
SALKELKNRRTLLAVGKVDQFSSSLPYGVLTSAFRTLTLKLLGLPAEDVALWKTRLARTL
DGYEGLAINLVPELGLLLERKSRQAPDSLSTDARARFNLMIVSLVNTFATPGCPLVLLID
DIHWIDAASLQVLEYLLKNSDALPLLLVVALRDPSSTDNLSVSEALGRLRDAAQRKIDII
PAPLSVKAVARWLADVFQRRSTDTLDLARLIHEKTGGNPLFVHEFFKRIVDDGLVTHNKY
QGKWYYDVPTIQARHYTENVVGLVLQQLEKMPEETRKLLGSLACLGSSGELGTISRVLNL
SDTDIRYQLHPAVIAQLITLSADTYTFPHDRVQEAAFALLDAGERGHLHLTTASLLAKAS
RQAAGNEMLFRAIHHVSAAIDCVQPPPQRKMFRELSMLAAQRAKRSGDYLSAQRYLQTAR
ALGGPASDNASDFALELEEAECAFLLGNLVAARHLSDRLLGSPGGLAEKISAANLLAEVH
MRQSDNPLALETALCWLTVSGITLNRHPDDAECETAWKMLHARIGDSPAAIFNQLPLMAN
PETEAAMSLLARAGLSASFISPRLHFMLLCQMLHLTLEHGITGASTSAMGWFGVLIGHRY
AEYRLGFKYAVLARELVTRHGYSVYEAKTLLPLDQLSVWTQPLSYTTECAKACFTAAVTH
GDLTVASFAACHQIINFLSRGDHLDNVLTSIERGLAFVRKSHFPDVERIMLIQRHYVENL
RTVSPGYWGGIDALPDSLLPTAPEQAPQQMSTMMFWFWLYRGMTHFVAGEYPQAEESLAQ
AEFFAWSAPGHIHLLDLHLYSALTLSAQLTPDTFSVEHRRKLQKHHDKIALWARINPGTF
ADKEALVYAEIVRLDGMNSIALEQYEKAVRLSRDSGFNPSNGLAHELAGRFALSCGYHTA
ADAHFRGAMAAWGRAGAQAKVNQLKQAYPHLVSPGQATPYDTIAFAQNEEIRDLQSVIKA
SRALSEEINLERLIQILMTMLLERAGAQRGLLIRVLDNNIPEIEASAYTGSDGVRVRIIK
DVPMATDMPLSVLSAVIRTGQEIRTGKPEEFSPFSQDPYLVTSGAAVLCVPMFKQARLVG
VLYLENRLMPEIFTAEHSKVVNLLGAHAAVSLETARLYAELLEENIQRRRVEKELRSSQT
SLMLGEQISHTGSWRWELEQDLMFMSEEYARILGLPEKQKMISMAEFLTFVHPDDYARVS
TVVTDGVRDGLPLRAEFRIMSADGVCRYILGIGNPVGVGTEVYEYYGTITDITAQRQTED
AVRVAQAELARVSRATTVGQLTSSIAHEINQPLMSIVSNAGASLRWLNHDPVRHDNIRTG
LEEIIAEGQRAGEIIRSLQTLTRKQEPVFSRIDLHYLVRHIMTLSRSEIEQRRVVVDYEL
KAADSFIFGDSVQIQQVLINLVMNAIEALSEVSDRTRTLRITTLNPDDGRVELRIMDNGV
GLDPDVMERVFDSFYTTKAQGMGMGLTISHAIIERHRGVLKAQAAEPCGSCFSFVVPTAG
NESAIKPQ
NT seq
5607 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacccgctgataccgccagaccgggctgcccttcctgattttcaggatgggcag
ttttttgcatttaaggacgatgtcatttttacccccttggttcaggagggttgcatcgtc
tggatgaacgggcggcacccattttcgaacggggctttcatcctcgccacggcggtcagc
gatgaggcggaagcggacgcgacccggctgctgaaaaatgaattcatcctgcgcccctat
ctgtccgacgcctgggcggtgaaacccgccgcctgcacgcagtatcgtggccggtacgcg
ctggtttatccgtcttttgcctttgactccctggcccgcatcacggggcagccgatggcc
tgcattgccagctttctggagcttgccatccggatatgtgccccactgcgccagatgcac
aggcacaacctgatccacggcgatatcaagccgggcaatatctttatccaggaagatgcc
tcatgccgccttgccgggtttggtctgacgacgggcactgcggaagagttaaaacagacc
cgcctgccgttttttggcggcacgctcgcctatatgtcacccgaacatacctcgcgcacg
caaagatcggtggacagccgcagcgatctctacagcctcggcatcgtcttttatgagctg
ctgaccggctctttgcccttcgacctcagcgaaggcggcctggaagagtggacgcatcac
catatcgcttcggagccacgtccgcctcatctgctgcgcgaacaggtaccggccatgctt
tcaaccctggtcctgcggctgttggccaagtcgcccgataaccgttaccagacggtcgac
gggctggtcgcagacctgcgtcgctgtcaggccactttgaccagtgacaatgacatcatg
ccctttcctcccggattgcaggatcgcgcacctgagtttcatctcgccgatacgttgtac
accccccatccacagggccgcgagcttatcgccgcgttcgacaaggttaatcagagcgga
acccacgcgcttgcggtcatcaacgggccttctggcatcggtaaatcttcgctgatcgcc
tcagcgttaaaagagctgaaaaaccggcgcacgctgctggccgtgggtaaagtcgaccag
ttttcgtcgtcgctgccttatggcgtgctgacctccgccttccggacgctgactctgaaa
ctgctgggattgccggcagaagatgtcgcgctatggaaaacccgcctggcgcgcacgctg
gacggttacgaggggttggccattaacctggtaccggaactgggcctgttgctggagaga
aaatcccggcaggctcccgactcgctgtcgaccgatgcccgggcccgttttaatcttatg
atagtcagcctggtcaatacctttgccacccccggctgtccgctggtgttgctgattgac
gatatccactggatcgatgccgccagcttgcaggtgctggagtatctgcttaaaaacagc
gatgccctgccgttgctgttggtggtggccctgcgcgatccctcttcaacggacaacctt
tcggtgtctgaggcgctgggccgtcttcgtgatgcggctcaacgtaaaatcgacatcata
ccggcgccgctctcggttaaagccgtcgctcgttggctggccgacgtcttccagcggcgc
tcgaccgacaccctcgacctcgctcgtctgatacatgaaaaaaccggcggcaacccgctg
ttcgtgcatgagtttttcaaacgcatcgtcgatgacggcctggtgacgcacaacaagtat
caaggcaagtggtattacgacgtgccgaccattcaggcacgtcattacaccgaaaacgtc
gtcgggctggtattgcagcaactggagaaaatgcccgaagaaacccgcaagctattgggc
agcctggcctgcctgggtagcagcggtgagcttggcaccatcagccgcgtcctgaacctc
tcagatacggatatccgctatcaactgcaccctgcggttatcgcccagttgattaccctg
tccgccgacacctacaccttcccccacgatcgcgtgcaggaagcggccttcgccctgctg
gatgccggcgaacgggggcacttgcacctcacgacggcaagtctgctggccaaagcttca
cgccaggcggcgggcaatgagatgctgttccgcgccattcaccatgtgtccgcagccatt
gactgcgtacagccgccgccacagcgcaaaatgttccgtgaattgagcatgctggcggcc
cagcgcgcgaagcgttccggtgactacctctctgcacagcgatacctacagaccgcccga
gcactcggcggccccgcgtctgataacgcgtccgatttcgcgctggagctggaagaggcc
gaatgcgcgtttttactgggtaacctggtcgcggcgcggcatttgagcgaccggttgctg
ggttctcctggcgggttggcggaaaaaatctccgcggccaatttgctggcggaagtgcat
atgcgccaatcggataacccactggcgctggagaccgcattatgctggctgacggtatcc
ggcattacgcttaaccgacaccccgacgatgcggaatgcgagacagcctggaaaatgctc
cacgcccgtatcggtgatagcccggccgcgattttcaatcaattgccgctcatggctaat
cctgaaacagaagccgcgatgagtttgctggcccgtgccggtctgtccgccagcttcatc
agcccacgcctgcacttcatgttgctgtgccagatgctgcatctgacgctggaacacggc
attaccggcgcctcaacgtcggcgatgggctggtttggcgtgctgatcggccaccgctat
gccgaatatcggttgggcttcaaatacgcggtgctggcccgtgaactcgtgacgcgccac
ggttacagcgtttacgaagcgaaaacgctgctgccgctcgatcagttgagcgtctggacc
cagccgctctcctacaccaccgaatgcgccaaagcctgcttcacggcggcggtgacgcac
ggcgatctgaccgtcgcctcttttgccgcctgccatcagatcattaactttttaagccgc
ggcgatcatctcgataacgtgctgaccagcatcgaacgggggctggctttcgtgcggaaa
tcccatttccctgacgttgaacgcattatgttgatccagcggcattatgtagagaattta
cgcaccgtatcccccggatattggggcggcatagatgcgttgcccgactcgctgctgcca
accgcgccggaacaggcgccgcagcaaatgtccaccatgatgttctggttctggctgtat
cggggcatgacgcattttgtcgccggcgaatatccgcaggcggaagagtcgctggcgcag
gccgaattctttgcctggtctgcgccggggcatatccacctgctggatttgcatctgtac
agcgcgctgacgttaagcgctcaactgacaccggataccttctccgttgaacaccggcga
aaactgcaaaagcaccatgacaaaatcgcgctctgggcgcgcattaatccgggcacattc
gccgacaaagaagcgctggtgtatgcggagattgtccgccttgacggcatgaacagcatt
gcactcgagcagtatgaaaaagcggtgaggctctcgcgggactcggggttcaatcccagc
aatgggctggctcacgaactcgcggggcgcttcgcgctcagttgcggctatcatacggcc
gcagatgcccactttaggggcgcaatggcggcatgggggcgcgcaggtgcgcaggccaag
gtaaatcagctgaaacaagcttatccccatctggtgtctcccggccaggcaacgccttac
gacaccatcgcctttgcccagaatgaagaaatccgcgatctgcaaagtgtcatcaaggca
tcgcgtgccctgtctgaagagatcaatctggaacggcttattcagatattgatgacgatg
ctgctggaacgtgccggcgcccaacgcggcctgttgatccgcgtattggacaacaacatt
cctgaaatcgaggcaagtgcctataccggcagcgacggcgtcagggtacggattataaaa
gatgtgccgatggccaccgacatgccgctgtcggtactgtcggccgtgatccgtaccggg
caagagatacgcaccggaaaaccggaagagttcagccctttctcgcaggatccttacctc
gtgacttccggcgctgccgtattgtgcgtgccgatgttcaagcaggcgcggctggtcggc
gtgttgtatctcgaaaaccgtttaatgcctgaaatcttcaccgccgagcattcgaaagtg
gttaacctgctcggcgcgcatgccgcagtatcgctcgaaaccgcaaggctgtatgccgaa
ttgctggaggagaacattcagcgccggcgggtggagaaagagctcagatcaagccagacc
tcgctgatgctgggcgagcagatcagccataccggcagttggcgttgggagctggagcag
gatctgatgttcatgtccgaagaatatgcccgtattctcggcctgcccgagaagcagaaa
atgatatctatggccgagtttcttaccttcgtccatccggacgactatgcgcgagtcagc
accgtcgtcaccgacggggtgagagacgggctgcccctgcgggccgagtttcgcatcatg
agcgcggatggcgtttgccgctacatattgggcatcggtaaccctgtcggcgtgggtacc
gaggtctacgaatactacggcaccatcaccgacatcaccgcccagcggcagacggaggac
gccgtcagggttgcccaggccgagctggcccgcgtttcccgcgcgaccaccgtcggccag
ttgacctcgtccattgcgcacgagatcaatcaaccgctgatgtcgattgtctcgaacgcc
ggagcaagcctgcgctggctgaaccacgaccctgtccgacatgacaatattcgtaccggg
ctggaggagatcattgcagaaggccagcgcgcaggtgaaatcattcgcagcctgcaaacc
ctgacgcgcaagcaggaaccggtcttttcccgtatcgatctgcactatcttgtccgccat
atcatgaccctgtcacgcagcgaaatcgagcaacgccgcgtggtggtggattatgaactg
aaggccgccgacagcttcatctttggcgatagcgttcagattcaacaggtattgattaac
ctggtgatgaacgcgatagaagccttgtcggaagtgagcgatcgtacgcgaacgctgagg
ataaccacgttgaacccagatgacggcagggttgagctacgcataatggacaacggcgtc
gggctggatcctgacgtaatggaacgggttttcgattctttctacactacaaaagcgcag
ggaatgggcatggggttgaccatcagccacgccattattgaacgccatcggggcgtgttg
aaagcgcaggcggcggaaccctgcggcagttgcttcagttttgtggtgccaaccgccggc
aatgaaagcgccattaagccgcaatga
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