Serratia plymuthica 4Rx13: SOD_c28580
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Entry
SOD_c28580 CDS
T02710
Symbol
rcsA
Name
(GenBank) colanic acid capsular biosynthesis activation protein A
KO
K07781
LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl02020
Two-component system
srl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SOD_c28580 (rcsA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SOD_c28580 (rcsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srl03000
]
SOD_c28580 (rcsA)
Transcription factors [BR:
srl03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
SOD_c28580 (rcsA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
Motif
Other DBs
NCBI-ProteinID:
AGO55831
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Position
3202732..3203361
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AA seq
209 aa
AA seq
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MPTIIMDSCSYTRLGLTDYLTTHGVKKRQINAINDIDDLHEKCSKLKPSLVFINEDCFIH
EADATERIKRVISLHPDTLFFIFMAITNVHFDDYLYVRKNVIISSKSIKPETMNQLLSHY
LEKKATRTEKTSFDQTPVTLSQTESNMLRMWMSGQGTIQISDQMQIKAKTVSSHKGNIKR
KIKTHNKQIIYHVVRLTDTLTSGIFVNSR
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgccaacgatcattatggattcatgcagctataccagattgggtttaacagactacctg
acaacacatggagtaaaaaaacgccaaattaatgccatcaacgatatcgacgatctgcat
gaaaaatgcagcaagttgaaacccagcctggtgtttattaacgaagattgctttatacac
gaagccgacgcgacggaacgtataaaacgggtgatttcactgcacccggacaccttattc
ttcatctttatggctatcaccaacgtacattttgacgattatttatatgttcgtaaaaat
gtcatcatctcgtcaaaatccatcaagccagagactatgaatcagctacttagtcactat
cttgagaaaaaagccactcgtacggaaaagacttcatttgaccaaacgcccgttacgctg
agtcaaacagaatcaaacatgttgcgcatgtggatgtcgggtcagggaaccatccagata
tccgaccagatgcaaattaaagccaagaccgtctcttcccacaagggaaatatcaaaaga
aaaattaaaacgcacaacaagcaaattatttatcatgttgtccgtttaaccgacacctta
accagtgggatatttgtcaatagccgctag
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