Serratia plymuthica 4Rx13: SOD_c28970
Help
Entry
SOD_c28970 CDS
T02710
Symbol
gabD1
Name
(GenBank) succinate-semialdehyde dehydrogenase [NADp(+)] GabD
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl00250
Alanine, aspartate and glutamate metabolism
srl00310
Lysine degradation
srl00350
Tyrosine metabolism
srl00650
Butanoate metabolism
srl00760
Nicotinate and nicotinamide metabolism
srl01100
Metabolic pathways
srl01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
SOD_c28970 (gabD1)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SOD_c28970 (gabD1)
00310 Lysine degradation
SOD_c28970 (gabD1)
00350 Tyrosine metabolism
SOD_c28970 (gabD1)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
SOD_c28970 (gabD1)
Enzymes [BR:
srl01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
SOD_c28970 (gabD1)
1.2.1.20 glutarate-semialdehyde dehydrogenase
SOD_c28970 (gabD1)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
SOD_c28970 (gabD1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AGO55870
LinkDB
All DBs
Position
3238402..3239877
Genome browser
AA seq
491 aa
AA seq
DB search
MSTTFSATLKDPALFREANYIDGQWLQAKDGQTIKIHNPATGELVGQVPAFGAEETAQAI
AAAKKAQPAWRALTAKERAGKLRRLFELMMEHQDDLARIMTAEQGKPLAESRGEIAYAAS
FIEWFAEEGKRVYGDTIPQNLPGRRIIVQKEPIGVFAAITPWNFPAAMITRKAGPGWAAG
CTGVIRPASQTPFSALAIAVLAERAGLPAGVCNVITGPSKAIGGELTANPDVRKLSFTGS
TEVGAQLLAQCAPTIKKTSMELGGNAPFIVFDDADLDAAVAGAVASKYRNAGQTCVCTNR
FLVQDGVYDAFAEKLKTAVAKLKVGNGMDEGVTIGPLINREAVEKVSEHIADAVKRGASV
LLGGQPHALGNNFYTPTILTDVPRQAKIFHEETFGPVAPLIRFEHEAEAIELANDTPFGL
ASYFYSRDIGRVMRVAEALEYGIVGINEGLISTEVAPFGGVKNSGLGREGSKYGIEDYLE
IKYLCLGGLDI
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgaccttctccgccaccctcaaagatcccgcgctatttcgcgaagcaaactac
atcgatgggcaatggctgcaggccaaagacgggcaaaccatcaagatccataacccggcc
accggcgagttggtcggccaggtgccggcctttggcgccgaagaaaccgcacaggcgata
gccgccgccaaaaaagcccagccggcctggcgcgcgctgaccgccaaagagcgtgcaggc
aagctgcgccgcctgttcgaactgatgatggaacaccaggacgatctggcgcgcatcatg
accgcagaacagggcaaacctctggccgaaagccgcggtgagattgcctatgcggcttcg
tttatcgagtggttcgccgaagagggaaaacgcgtttacggtgacaccattccgcaaaac
ctgcccggccggcgcattatcgtgcaaaaagaacccatcggggtatttgccgccattacg
ccgtggaatttcccggcggcgatgatcacccgcaaagccggccccggctgggccgcggga
tgcaccggggtgatccgccccgccagccagaccccgttctcggcgctggcgattgcagtg
ctggccgaacgcgccggtttaccggcgggcgtctgcaacgtgattaccgggcccagcaaa
gcgatcggcggcgaactgaccgcgaacccggacgtacgcaagctctcctttaccggcagc
acagaggtaggcgcgcagttgctggcgcagtgtgcgcccaccatcaaaaagaccagcatg
gaactgggtggcaacgcaccttttatcgtgtttgacgatgccgatctggacgccgccgtc
gccggggcggtagcctccaaataccgtaatgccggccagacctgcgtgtgcaccaatcgc
tttctggtgcaggacggcgtctacgacgcttttgcggaaaagctgaaaaccgcggtggcg
aagctgaaagtgggcaatggcatggacgagggcgtcactatcggcccattgattaaccgg
gaagcggtggaaaaagtcagcgagcatatcgccgatgccgtgaaacgcggtgcttcggtg
ctgctgggtggccaaccccatgcactgggcaataacttctatacgccgaccatcctgacc
gacgtaccgaggcaggccaaaattttccatgaggaaacctttggcccggtggcacccttg
atccgttttgagcacgaagccgaagccatcgaactggcgaacgacacgccgttcggcctg
gcctcgtacttctacagccgcgacatcggccgggtgatgcgcgtggccgaagcgctggaa
tacggcattgtcggcatcaatgaagggctgatctctaccgaggtcgccccctttggcggg
gttaaaaactccggcctggggcgcgaaggatcgaagtacggcatcgaagattatctcgag
atcaaatatctgtgccttggcgggctggatatctga
DBGET
integrated database retrieval system
