Serratia plymuthica 4Rx13: SOD_c29150
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Entry
SOD_c29150 CDS
T02710
Name
(GenBank) transcriptional regulatory protein
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl02020
Two-component system
srl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SOD_c29150
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SOD_c29150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srl03000
]
SOD_c29150
Transcription factors [BR:
srl03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
SOD_c29150
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
wHTH-PRTase_assc
HTH_28
Glyco_hydro_59_C
HTH_29
Motif
Other DBs
NCBI-ProteinID:
AGO55888
LinkDB
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Position
3259047..3259736
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AA seq
229 aa
AA seq
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MVQMSRKNAESIMSQRGWLSHMPESFRHRLFQHALLVKCAPGQVIFSPGDPAEGIYGFIK
GMVIIKTAPRDSTPRLIDLAVPGDWTGDDGFMTGQPRRFQLVAQSGSWMMHVPLVAMEQM
AAQNPNDMRAFGVISILGSDSLLRVVNDLQKKDVSARVASVLHRMSWPTNAPVTLSQENI
SIIANTSRKQVNNIIQRFVEEGWIGAGYRSITVTNPVALRQHAEQDIDN
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atggtacagatgtcgcgaaaaaacgcagaaagcataatgagtcaacgaggctggttgtct
cacatgcccgaatccttcaggcacagactttttcagcatgccttgttggtgaaatgcgcc
cccgggcaagtcatcttcagcccgggcgatcctgcggaggggatctacggtttcatcaaa
ggaatggtgatcatcaagacggcccctcgcgactcaacgccgcggctgattgaccttgcc
gtgccaggcgactggacgggtgacgacggctttatgaccggacagccgcggaggtttcaa
cttgttgcgcagagtgggtcctggatgatgcacgttcccctggttgcaatggaacagatg
gccgcgcaaaaccccaatgacatgcgtgccttcggcgtgatttctattctggggtcagac
tcactgctcagagtcgtgaatgatttgcagaaaaaagatgtcagcgccagggtggcatcg
gtgctgcaccgcatgtcctggccgacaaacgctccagttaccctttctcaggaaaatatc
agcattattgccaatacctcccgtaaacaggtcaacaacattattcaacgcttcgtggag
gaagggtggattggggcgggttaccgttccatcaccgtcaccaaccctgtggcgttacgg
caacatgcagagcaggacatcgataactga
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