Serratia plymuthica 4Rx13: SOD_c29320
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Entry
SOD_c29320 CDS
T02710
Symbol
acoR
Name
(GenBank) acetoin catabolism regulatory protein AcoR
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
srl
Serratia plymuthica 4Rx13
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
srl03000
]
SOD_c29320 (acoR)
Transcription factors [BR:
srl03000
]
Prokaryotic type
Helix-turn-helix
Other families
SOD_c29320 (acoR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
HTH_8
PAS_4
AAA_5
HTH_23
HTH_28
HTH_50
nSTAND6
AAA_16
HTH_7
Mg_chelatase
HTH_30
AAA
Sigma70_r4
AAA_2
HTH_29
HTH_AsnC-type
AAA_22
Sigma70_r4_2
HTH_22
Motif
Other DBs
NCBI-ProteinID:
AGO55903
LinkDB
All DBs
Position
complement(3274923..3276866)
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AA seq
647 aa
AA seq
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MNQSQREHIATVMASLSNKAHLLAPRFHEQTIRDSWQRCVEHHGLDPRRMQEARILPWHE
LREHRQEMEEFRHIAHHGLTVLYQQIAAAGYVVLLTDARGITVDYLGDANAEISLRRAGL
FLGAQWTEACAGTCAVGTALATGKALTVHQADHFDATHIPLTCTAVPLFDPQGQLNAILD
ISALSSPQPKSSQQLALQLAKIYAHQIENAWFEHRHRGDWVLKLSPASSFVEVSPDFLIA
FDAAGKVVGHNHRAQRMLENELGIAAPPVHCRSTLLGWPIEQLFNTSIDSLPDWLASASG
QQGTLERARSGEKLYVTAVQPVRRAPRKAAASQGALPPALAALNGGDAALQLQLQRAARL
LEAPLHLMVHGETGCGKEFFAKAFHQASNRRHRAFVAVNCAAIPAALIESELFGHLPGSF
SGAGSKGRRGLIQEADGGTLFLDEIGDMPLEMQTRLLRVLAEQEVLPVGASRPVSVDIRV
ISASHHALDQLVQEGRFRADLFYRLQGARISLPALRQRSDLDWLVDKLLAGKAQLSAAAR
RRLHQHRWPGNLRELSNALDYAAALCDGGRIEATDLPEGLTAAIPASPLPMVNAEADAAL
PPEAQLLIQYLRAARWNHSAVARQMGISRMTLYRRMQRFGIQSPVHD
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcagagccagcgcgaacacattgctacggtaatggccagcctcagcaacaaggcg
catttgctggccccgcgtttccatgaacagactattcgcgactcctggcagcgctgcgtg
gaacatcatggccttgatccccgccgcatgcaggaagcgcgcatcttgccgtggcatgag
ctgcgggaacaccgccaggaaatggaagagtttcgtcacattgcccaccacggcctgacg
gtgttgtatcagcagattgccgccgccggctacgtggtgctgttgaccgatgcgcgcggt
atcaccgtggattacctgggggacgccaatgcggaaatcagcctgcgtcgtgccgggctg
ttcctcggggcgcagtggacggaagcctgcgcaggcacctgcgccgtgggcaccgcgctg
gccaccggcaaggcgctaacggtgcatcaggccgatcatttcgacgccacccatatcccg
ctgacctgcaccgccgttcccctgttcgatccgcaggggcagttaaacgccattcttgat
atttccgcgctcagctcaccgcaaccaaaatccagccagcagttggcgctacagctcgct
aaaatttatgcgcatcagattgaaaatgcctggtttgagcaccggcatcgcggcgattgg
gtgctgaaactcagcccggcatcgtcgtttgttgaggtcagcccggatttcctgatcgcc
tttgatgccgccggcaaagtggtggggcataaccaccgcgcccagcgcatgctggaaaac
gagctgggcatcgccgcgccgccggtacactgccgcagcacgctgctcggctggccgatt
gaacaactgtttaatacgtccatcgacagtcttcccgattggctggccagcgccagcggg
cagcagggtacgctcgaacgcgcccgcagcggggagaaactctacgttaccgccgtgcag
cccgttcggcgtgcgccacgtaaggccgcagccagccagggcgcgttacctccggcgctg
gccgcgctgaacggcggcgacgcggcgttgcagctccagctccagcgtgccgcccggctg
ctggaggcgccgctgcacctgatggttcacggtgaaaccggctgcgggaaagagtttttt
gccaaagcctttcaccaggcaagcaaccgccgtcatcgggcgtttgtggcggtgaactgc
gccgcgatcccggcggcgctgattgagagcgaactgttcggccatctgcccggcagtttc
tccggcgcaggcagtaaagggcggcgcgggctgatccaggaagccgacggcggcacgttg
ttccttgatgagataggcgatatgccgctggagatgcaaacccggttgctgcgggtgttg
gcggagcaggaggtgttgccggtgggggcctcgcgtccggtatcggtggatatccgcgtg
atctccgcgtcgcaccacgcgttggatcaactggtgcaggaagggcgttttcgtgccgat
ctgttctaccgtttgcagggggcgcgtatctcgctgcctgcgttacgccagcgcagcgac
ctcgactggctggtggataaactgctggccggtaaggcgcagctctccgccgccgcgcgt
cgccgcctgcatcagcaccgttggccgggcaacctgcgtgaactgagcaatgcgctggat
tacgccgccgcactctgcgatgggggccgcatcgaggccaccgatctgccggaagggttg
acggcggcgatccccgccagcccgctgccgatggttaacgccgaagccgatgcggcactg
ccgccggaggcacagttgttgatccaatatctgcgtgccgcccgctggaaccacagcgcc
gtcgcacggcaaatgggcatcagccgaatgacgctctatcgccgcatgcagcgcttcggt
attcagtcgccggtgcatgactaa
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