Serratia plymuthica 4Rx13: SOD_c30050
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Entry
SOD_c30050 CDS
T02710
Symbol
lacZ
Name
(GenBank) beta-galactosidase LacZ
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl00052
Galactose metabolism
srl00511
Other glycan degradation
srl00600
Sphingolipid metabolism
srl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
SOD_c30050 (lacZ)
09103 Lipid metabolism
00600 Sphingolipid metabolism
SOD_c30050 (lacZ)
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
SOD_c30050 (lacZ)
Enzymes [BR:
srl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
SOD_c30050 (lacZ)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Glyco_hydro_2_N
Bgal_small_N
LacZ_4
Glyco_hydro_2
Glyco_hydro_2_N2
Motif
Other DBs
NCBI-ProteinID:
AGO55975
LinkDB
All DBs
Position
complement(3360163..3363282)
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AA seq
1039 aa
AA seq
DB search
MKQPLYSVNDNPPDSVLSQVLARQDWQNPAVTHLNRLPAHPQFRSWRALEEARDNRRSDR
RISLDGEWQFVYLNRPEAADPRWLVADGPDSRAVTVPSNWQMDGYDAPIYTNVRYPISTE
PPFVPQENPAGCYSREIDIPEAWLKAGKTRIIFNGVNSAFHLFCNGVWIGYSQDSRLPAE
FDLTDALHAGGNRICAMVMRWSSGTWLEDQDMWRMSGIYRSVSLLHKPDTHLTDFQLAAG
LDTEYRHGTLQASVHVAAGKAQPAGLQVELSLWRGDEKIAGQRKPLGTEAIDERGAYADR
VTFALPVQAPDLWSAELPHCYRAVIALYGADGELIEAEAADTGFRRVEITDGLLKVNGKP
LLIRGVNRHEHHPQRGQAINEEDMIQDILLMKQNNFNAVRCSHYPNNPRWYELCDRYGLY
VVDEANIETHGMVPMARLSDDPSWFPAYSARVTRMVQCNRNHPSIIIWSLGNESGHGSLH
DALYRWIKSSDPTRPVQYEGGGANSAATDILCPMYARVDEDQLIPGVPKWSIKKWVGMPG
ENRPLILCEYAHAMGNSLGDFDKYWRAFRQYPRLQGGFVWDWADQSLLKDDGNGLLAPAY
GGDFNDTPNDRQFCLNGLVFADRTPHPSLHEAKQAQQFFQFSLVGHAPLEVAVGSEYLFR
RTDNERLHWRIEQDGREWRSGEVALDIPPQGNAVVTLAERIDLPANARNVTLILEVIQPE
ATAWSSAGHRVAWQQFRLTTALALPDAPKPGVRPELQTHDDGYRVLHGEQQWFIDRKSGL
LTQWTVAGENKLVSPFTDQFVRAPLDNDIGVSEVERIDPNAWVERWKKAGLYAMQRACTQ
CTAAAYEDRVEIRSTFHYRYGDEVLIVSHWQMMIDCHGALKINVEGERAGHLPPLARIGM
VFQATPAAADVEWLGLGPHENYPDRQTSACFSRWRLPLSEMVTPYVFPTENGLRCNTQEL
NWGGWCVDGLFHFSIMPYGSKQLMDVDHWHLLRAEPGIWITLDAQHMGVGGDDSWTPSVH
EEWLLKETQWRYQVSVKHQ
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagcctctttattcggtaaacgataacccgccggacagcgttctctctcaggtg
ctggcccggcaggactggcagaacccggccgtcacccacctcaacagattgcccgcccac
ccgcaatttcgcagctggcgcgcgcttgaagaggccagggataaccggcgttccgatcgg
cgcatttcgctggatggcgaatggcagtttgtttatctgaaccgccccgaggcggcggac
ccgcgctggttagtggcggatggcccggatagccgggccgtaacagtgccttctaactgg
cagatggacggctatgatgcgcctatctacaccaacgtccgctacccgatctcgaccgag
ccgccttttgtgccgcaggagaacccggcggggtgctattcgcgcgaaattgacatccct
gaagcctggctgaaggctggcaaaactcgaatcatcttcaacggggtaaactcggcgttc
caccttttttgcaatggggtgtggattggctattcgcaggacagccgtttaccggccgag
ttcgatttaaccgacgcgctgcatgccggtgggaaccgtatctgcgcgatggtgatgcgc
tggagctcggggacctggcttgaggatcaggacatgtggcgcatgagcggcatttaccgc
tcggtgtcattgctgcacaagccggacacccaccttaccgattttcaactggccgccggg
ctggatacggagtaccggcacggcaccttgcaggcctcggtgcatgtcgcggcggggaaa
gcccagccggcggggctgcaggtggagttatccctgtggcgaggcgacgaaaaaatcgcc
ggccaacgcaagccgctgggcacggaggcgattgacgagcggggggcttatgccgatcgg
gtgacctttgcgttgccggtgcaggcgccggatttatggagtgccgagttaccccattgt
tatcgcgccgtcattgcgctttatggcgccgatggggagctgattgaggccgaggcggcg
gacaccggttttcgccgcgtagagataacggacgggctgctgaaagtgaacggcaagccg
ctgctgatccgtggcgtcaaccggcatgagcaccacccgcaacgcggccaggcgatcaat
gaagaggacatgattcaggatattctgctgatgaagcagaacaactttaatgccgtgcgc
tgttcgcattaccccaacaatccccgttggtacgagctctgtgaccgctacggtctttac
gtggtggatgaggccaatatcgaaactcacggtatggtgccgatggcgcggctgagtgac
gatccgagctggttcccggcttacagcgcccgcgtgacccgcatggtgcagtgcaaccgc
aaccatccttccatcatcatctggtcgttgggcaatgagtccgggcatggcagtttgcat
gatgcgctttatcgctggatcaaaagcagcgatcccacacggccggttcagtacgaaggc
ggcggggccaatagcgcggccacggatatcctttgcccgatgtatgcccgagtggatgaa
gatcaactcatccctggggtgccaaaatggtcgataaaaaaatgggtcggcatgccgggc
gaaaaccgcccgctgatactgtgcgaatacgcccacgcgatgggcaacagcctgggggat
tttgataagtactggcgggcgtttcgtcagtatccgcggctacagggcgggtttgtctgg
gactgggccgaccaatcgctgcttaaagacgatgggaatggcttgcttgctccggcctat
ggcggcgacttcaacgacacgcccaatgaccggcagttctgcctgaacggcctggtgttt
gccgaccgcacgccacacccttcgctccatgaagccaaacaggcgcagcagttcttccag
ttttcgttggtgggccatgcgccgctcgaggtggccgtcggcagtgaatacctgttccgc
cgtaccgacaatgaaaggctgcactggcgcattgaacaggatgggcgcgaatggcggtcg
ggtgaggtggcgttggacatcccgccacagggcaatgccgtcgtcaccctggcggaacgt
atcgatttgccggcgaatgcccgcaatgtcaccctgatccttgaagttatccagccggag
gccaccgcctggtcatcggccgggcatcgcgtcgcatggcaacaattccggctgacgacg
gcgctggcgttgccggatgcgccaaaacccggcgttcgccccgaactgcagactcatgac
gacggttatcgagtgctgcatggcgaacagcaatggtttatcgaccgcaagagcggtttg
ttgacgcagtggacggtggcgggtgaaaacaaactggtgagcccgttcaccgaccagttt
gttcgtgcgccgctggataacgacattggggtcagtgaagtcgaacgaatcgaccctaac
gcctgggtggaacgctggaaaaaagccgggctttatgccatgcagagagcctgcacccag
tgcacggcggcggcttacgaagaccgggtggagatccgcagcaccttccattaccgctat
ggcgatgaggtgctgatcgtcagccactggcagatgatgattgattgccacggcgcgctg
aagatcaacgtcgaaggggagcgcgccggccatttgccgccgttggcgcgtatcggcatg
gttttccaggccacaccggcggcggcagacgtggagtggttagggttggggccgcatgag
aactaccctgaccgccaaacaagtgcctgcttctcacgctggcgcctgccgttgagcgag
atggtcaccccgtacgtcttccccacggagaatggcttgcgttgcaacacccaggagctc
aattggggaggctggtgcgtcgacggattattccatttctccatcatgccttacggcagc
aaacagttgatggacgtcgaccattggcatctgttgcgcgccgaacccggtatctggatc
accctggacgcgcagcacatgggcgtggggggcgatgactcctggacgccgagcgtgcat
gaagagtggttgttaaaggaaacgcagtggcgttatcaggtcagtgttaagcatcagtaa
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