Serratia plymuthica 4Rx13: SOD_c30340
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Entry
SOD_c30340 CDS
T02710
Symbol
ddpC
Name
(GenBank) putative D,D-dipeptide transport system permease protein DdpC
KO
K02034
peptide/nickel transport system permease protein
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SOD_c30340 (ddpC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srl02000
]
SOD_c30340 (ddpC)
Transporters [BR:
srl02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
SOD_c30340 (ddpC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Romo1
Motif
Other DBs
NCBI-ProteinID:
AGO56004
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All DBs
Position
complement(3397022..3397912)
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AA seq
296 aa
AA seq
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MSSISFEKATVPERDLAGLESEGTLPASRPRRRRRVPVTLLLAWAVIAIAVLWALAPQLF
TAYSGTEGIAGAQRLAPGGAHWLGTDQLGRDLYARIVYGASQTLSAALVAVALGLLLGTA
LGLIAGAVGGVADDAVMRLVDVLLSIPGLLLSLSIIILLGFGTVNAAIAVGITSVANFAR
LARAEVVRVRHSDYVEAAYGSGGTFWAVLWRHILPNSLTSVIAFSALQFGSAILAIATLS
FLGYGTPPPTPEWGLLIAEGRNYISTAWWLTTFPGLAVVAVVLAANRISRALARTH
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtatctcctttgaaaaagcgaccgtgccggaacgcgatctggccgggctggaa
agcgaaggcaccttgccggccagccgcccgcgccgccgcaggcgcgtgccggtgacgctg
ctgctggcctgggcggtgatcgccattgcggtgctgtgggcgttggcgccgcagctgttt
accgcctacagcggcaccgagggcattgccggcgcgcagcggctggcgccgggcggggcg
cactggctgggcaccgatcaactggggcgcgatctttacgcgcgcattgtttatggcgct
tcgcaaacactgtccgccgcgctggtggcggtggcgctgggcttgctgctgggcaccgcg
ctcgggctgattgccggtgcggtgggcggtgtggcggacgatgcggtcatgcgcctggtc
gatgtgctgctgtctattcccggcctgctgctgtcgttaagcatcattatcctgctgggg
tttggcacggtgaacgccgccatcgccgtcgggatcacctcggtcgccaatttcgctcgc
ctggcgcgcgcggaagtggtgcgggtgcggcacagcgattacgtcgaggcggcctatggc
agcggcggcaccttttgggcggtgctgtggcggcacattctgccgaactcgctgacctcg
gtgattgccttctcggcgctgcaattcggcagcgccattctggcgatcgccaccctgagc
ttcctcggttacggcacgccgccgccaacgccggaatgggggctgttgatcgccgaaggg
cgcaactacatttccaccgcctggtggctgaccactttccccggtttggcggtggtggcg
gtggtgctggcggctaaccgcatcagccgcgcgctggcgaggacgcattga
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