Serratia plymuthica 4Rx13: SOD_c31580
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Entry
SOD_c31580 CDS
T02710
Symbol
rtn
Name
(GenBank) protein Rtn
KO
K26148
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
srl
Serratia plymuthica 4Rx13
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
SOD_c31580 (rtn)
Enzymes [BR:
srl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
SOD_c31580 (rtn)
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GFIT
Motif
Pfam:
EAL
CSS-motif
Motif
Other DBs
NCBI-ProteinID:
AGO56126
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All DBs
Position
3537727..3539313
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AA seq
528 aa
AA seq
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MGLKRAFARHVSHRRRSLAKSSIVALVFFVLFTGITLLLINHQRTQYQRTVEQRTQKFTL
ENLDSLTEIMLQLMPLTERSCASSQPDITYQAAFNSGVRSFLLVKNGFAYCSSATGSMML
ALKNIYPEIDPRQTRDLKLQQGTPLVPGKPAVAVWLRHPGEENTGVLATLDINLMPYLLF
ASRDARTPGIAIILGDLALTTFSPNLMPVSQLPNGQADRLAISGTPMTILFYNETLTPND
IRLTLLGSLVLSLMIGVLCYYMLLLRQSPERALMRGIKRNEFFIEYQPVFHTRKGAVAGL
EALIRWQHPIEGRIPPDLFIPYAESEGLIVPLTRHLFRLIAEDVPRLATVLPKGAKLGLN
ISPSHLSAPSFHQDVYELLKQLPSNYFTLVFEITERGMVEEANALAEFDWLHQQGIEIAI
DDFGTGHSALIYLERFTMDYLKIDRGFVNTIGQDTVTAPVLDAVISLAKKLKMQTVAEGV
ETAEQLHFLQERDVNFMQGYYFSKPLSIDNFVTFCTSQQVFDYQAQKA
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgggcttgaaaagggcatttgcacgccatgtttcgcacagacgacgcagcctggctaaa
agcagcattgtcgctctggtattttttgtcctgtttacgggtatcacacttctcctgatt
aatcaccagcgcacacaatatcaacgcacggtagaacaacgcacacagaaattcaccctc
gaaaatctggatagtctgacggaaatcatgctgcaattgatgccgttgacggaacgctcc
tgcgcttccagtcagccggatattacctatcaggcggcgtttaattccggcgtgcggagc
ttcctgctggtgaaaaacggttttgcctattgctcctcggctaccggcagcatgatgctg
gcactgaaaaatatttatccggaaatcgatccgcgccagacgcgggatctcaaactgcag
caaggcacccctcttgtgccgggaaaacccgcagtagccgtctggttgcgtcatcccgga
gaggaaaacaccggcgtgttggcgaccctggatatcaacctgatgccctatctgctgttc
gcttcgcgtgacgcacgcacacccggcattgccattattctgggcgatctcgccctgacc
accttcagcccgaacctgatgccggtgagccagttgccgaacggccaggccgatcgctta
gccatctcgggcacgccgatgacgattctgttttataacgaaacgctgacgcccaatgat
atccgcctgaccctgttgggcagcctggtgctgtcattgatgatcggcgtcctgtgctac
tacatgctgctgctgcgccaaagcccggagcgtgcgttgatgcgcggcatcaagcgcaat
gaattctttatcgaataccagccggtgttccatacccgcaaaggcgccgtcgccggactg
gaggcgctgatccgctggcagcatccgattgaagggcgtatcccgccggacctgtttatc
ccctacgccgaaagcgaagggctgattgtgccgctgacgcgccatctgttccgcctgatc
gccgaagacgtgccacgcctggcgacggtgttgccaaaaggcgccaaactgggtctgaac
atctccccttcccatctgagcgccccctccttccatcaggacgtgtacgaactgctgaaa
cagctgcccagcaactactttacgctggtattcgagataaccgagcgcggcatggtagag
gaagccaacgcgctggcggagtttgactggctgcaccagcaaggcattgaaatcgccatc
gacgatttcggcaccggccacagcgcgctgatttatctggaacgctttaccatggactat
ctgaaaatagaccgtggtttcgtcaacaccatcggtcaggatacggtcaccgcaccggtg
ctggacgcggtgatctcactggctaaaaagctgaaaatgcaaaccgtggcggaaggcgtg
gaaaccgccgaacaattgcacttcctgcaggaacgggacgttaactttatgcaggggtat
tatttcagcaagccgttgagcatcgacaacttcgtgacattctgcactagccagcaggtc
tttgattatcaggcgcaaaaagcctga
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