Serratia plymuthica 4Rx13: SOD_c31860
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Entry
SOD_c31860 CDS
T02710
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
srl
Serratia plymuthica 4Rx13
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srl03032
]
SOD_c31860 (gyrA)
03400 DNA repair and recombination proteins [BR:
srl03400
]
SOD_c31860 (gyrA)
Enzymes [BR:
srl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SOD_c31860 (gyrA)
DNA replication proteins [BR:
srl03032
]
Prokaryotic type
DNA Topoisomerases
SOD_c31860 (gyrA)
DNA repair and recombination proteins [BR:
srl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SOD_c31860 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-ProteinID:
AGO56151
LinkDB
All DBs
Position
complement(3573320..3575971)
Genome browser
AA seq
883 aa
AA seq
DB search
MSDLAREITPVNIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEVRMSKIAHELLADLEKETVDFVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT
NIPPHNLSEVINGCLAYIDDENISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI
YLRARAEVETDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG
MRIVVEIKRDAVGEVVLNNLYSLTQLQVTFGINMVALHQGQPKLLNLKDILQAFVRHRRE
VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAGLVAQAWDLGNV
GAMLERAGDDAARPEWLEPEFGIRDGKYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE
LLTFIAELIFILENPDRLMEVIREELVAVKELYNDGRRTEITANTSDINIEDLINQEDVV
VTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEANERITAILPVREYEEGRHVFMATASGTVKKTAL
TEFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSANGKVVRFPETQVRSMGRTATG
VRGINLGEGDGVISLIVPRGEGDILTVTQNGYGKRTAVTEYPTKSRATQGVISIKVSERN
GQVVGAVQVETTDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTAEDENVVGLQRVA
EPVEDEELDSLEPGAEEAEEDAAPLDDADDDSEAADDAEDDNA
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgccagagaaatcacaccggtaaacatcgaagacgagttaaaaaactcg
tatctggattacgcgatgtccgtcattgtcggacgtgcgctgccagatgttcgtgatgga
ctgaagccggtgcaccgccgcgttctgttcgcgatgagtgtattgggtaacgactggaat
aaaccatacaagaaatcggcccgtgtcgtcggggacgtgatcggtaaataccacccacac
ggtgacagcgcggtatacgacaccatcgtgcgtatggctcagccgttttcactgcgctat
atgctggtggacggtcagggtaacttcggctccgtcgacggcgactccgccgcggcgatg
cgttataccgaagtacgcatgtccaaaattgctcacgaattgctggcggatctggaaaag
gaaaccgtcgacttcgtgcctaactatgatggcaccgagcagatcccggccgtcatgcca
accaagatcccgaacctgctggttaacggctcgtcgggcatcgctgtgggcatggccacc
aacattccgccgcataacctgtctgaggttatcaacggctgcctggcttacatcgatgat
gaaaacatcagcatcgaaggcctgatggaacacatcccggggccggacttcccgacggcg
gcgatcatcaacggtcgccgtggcatcgaagaagcctaccgtaccgggcgcggtaaaatc
tacctgcgcgctcgtgccgaagtagaaaccgacgccaaaaccggccgcgaaaccattatt
gttcacgaaatcccgtatcaggtgaacaaagcgcgtctgatcgagaagatcgccgagctg
gtaaaagaaaaacgcgtggaaggcatcagcgcgctgcgtgacgagtccgacaaagacggc
atgcgcatcgtggttgaaatcaaacgcgacgcggtcggcgaagtggtactgaacaatctg
tattcgctgactcagctgcaggtcactttcggcatcaacatggtggcattgcatcagggc
cagccaaaactgctgaacctgaaagacattctgcaggcgtttgtccgtcatcgccgtgaa
gtggtgacccgccgtaccatcttcgaactgcgtaaagcccgtgaccgcgcccatattctg
gaagcgttggccatcgcgctggcgaacatcgatccgatcattgaactgatccgtcgtgcg
ccgacccctgcggaagctaaagccgggttggttgctcaagcctgggatctgggcaatgtg
ggcgcgatgctggaacgtgccggtgacgacgcggcccgccctgagtggctggagccggag
tttggcatccgtgacggtaaatactacctgaccgagcaacaggctcaggcgattttggat
ctgcgtctgcagaaactgaccggcctggagcatgaaaagctgctggacgagtataaagag
ctgctgactttcatcgctgagctgatctttattctggaaaaccccgatcgtctgatggaa
gtgatccgcgaagaactggtggcagtcaaagagctgtacaacgacggccgtcgcaccgag
atcaccgccaacacctcagatatcaatatcgaagacctgatcaaccaggaagacgtggtc
gttacgctgtcgcaccagggctatgtgaaatatcagccgctgagcgactatgaagcgcaa
cgccgtggcggtaaaggcaagtcagccgcgcgtattaaagaagaagactttatcgatcgt
ctgttggtggccaacacccacgatacgatcctgtgcttctccagccgtggccgcctgtac
tggatgaaggtgtatcagttgcctgaagccagccgtggcgcacgcggtcgtccaatcgtc
aacttgctgccgctggaagccaatgagcgtatcaccgccattctgccggtgcgcgagtat
gaagaagggcgtcacgtgtttatggcaaccgccagcggcaccgtgaagaaaaccgctttg
accgagttcagtcgtccgcgcagcgccggcatcatcgcagtcaacctcaatgagggcgat
gagctgattggtgttgacctgaccgacggcagcaacgaagtcatgctgttctccgccaac
ggtaaagtggtgcgcttcccggaaacgcaggtgcgttcaatgggccgtaccgctaccggc
gttcgcggtatcaacctgggtgaaggcgatggcgtcatttccctgatcgttccgcgcggt
gaaggcgatatcctgaccgtgacccagaatggctacggcaaacgaaccgcagtcaccgaa
tacccgaccaagtcgcgcgctacccaaggggtaatctccatcaaggtgagcgagcgtaat
ggtcaggttgtcggcgcggtgcaggtggaaaccaccgatcagatcatgatgatcaccgat
gccggtacgttggtgcgtacccgcgtgtcggaagtcagcgtggtcggccgtaatacccag
ggtgttacgttgatccgtactgcggaagacgagaacgtcgtcggtctgcagcgcgttgcc
gagccggtggaagacgaagagttggacagccttgagccgggtgcggaagaagcggaagaa
gacgccgcaccgctggacgacgcagacgatgattctgaagccgcagatgatgcggaagac
gacaacgcctaa
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