Serratia plymuthica 4Rx13: SOD_c31990
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Entry
SOD_c31990 CDS
T02710
Symbol
menD
Name
(GenBank) 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase MenD
KO
K02551
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:
2.2.1.9
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl00130
Ubiquinone and other terpenoid-quinone biosynthesis
srl01100
Metabolic pathways
srl01110
Biosynthesis of secondary metabolites
srl01240
Biosynthesis of cofactors
Module
srl_M00116
Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
SOD_c31990 (menD)
Enzymes [BR:
srl01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.9 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
SOD_c31990 (menD)
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Motif
Pfam:
TPP_enzyme_M_2
TPP_enzyme_N
TPP_enzyme_C
Motif
Other DBs
NCBI-ProteinID:
AGO56164
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Position
complement(3590572..3592245)
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AA seq
557 aa
AA seq
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MSTSVFNRRWAALLLEALARHGVRHVCIAPGSRSTPLTLAAAANRSFVCHTHFDERGLGH
LALGLAKASREPVAVIVTSGTAAANLYPSLIEAGLTGERLVFLTADRPPELINCGANQAI
RQTGLYSSHPTLIIELPRPTPDIPASWLASTVDSAMARLQHGALHINCPFAEPLYGGDEQ
HYADWSAALGDWWQGSQPWLREMDPHAVLKQPDWFSWRQKRGVVVAGRMSAQEGEQLAQW
AATLGWPLIGDVLSQTGQPLPCADLWLAQPQAQRILQDAQLVVQFGSSLTGKRLLQWQEQ
CRPQEYWLIDDLPGRLDPAHHRGRRIRSGVAQWLELHPAQPRSRWAQELAQLADQALDSV
SGYLVNRFGEAQLAHRLPELLAENGQLFLGNSLVVRLIDALTRLPAGYPVFSNRGASGID
GLISTAAGVQRATAKPTLAVVGDLSALYDLNALALLRQCSAPTVLIVVNNNGGQIFSLLP
TPQEDRQRFYCMPQDVDFSHAAAMFQLNYARPENWGQLRQAVEQGWRHGGATLIELQVPP
SDGAETLRLLVQQMAVQ
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaagtgtttttaatcgccgatgggcagcgttgttgttggaagcgctggcccgc
cacggagtgcggcatgtttgtatcgctccgggatcgcgctctacgccgttgacgctggcc
gcagcggctaacaggtcttttgtctgccatacccattttgatgaacgcgggctgggccat
ctggcgcttggcctggctaaggcatcgcgggagccggtggcggtgatcgtcacttccggc
accgccgccgccaatctctatccctcgctgattgaagccgggctgaccggtgaacggctg
gtgtttctcaccgccgatcggccgccagagctgatcaactgcggcgccaaccaggcgatc
cgccaaaccggcctttattccagccatccgacgctgatcatcgaactgccgcgcccgact
ccggatattcccgccagttggttggcatccaccgtcgacagcgccatggcgcgcttgcag
cacggcgctttacacatcaactgcccctttgccgaaccgctgtacggtggcgatgaacaa
cactacgccgactggtcggcggcgctcggcgactggtggcaaggcagccagccctggctg
cgggaaatggatccccatgcggtgctgaaacaaccggattggttctcctggcggcaaaaa
cgcggtgtggtggtggcagggcgcatgagcgcgcaagagggcgagcagttggcgcaatgg
gccgcaacgcttggctggccattgattggcgacgtgctgtcccagaccggccagccactg
ccctgtgccgatttatggctggctcagcctcaggcgcagcgcatcttgcaagacgcgcaa
ctggtggtgcaattcggcagcagcctgaccggcaaacgcctgttgcaatggcaggagcaa
tgccggccgcaggagtattggttgatcgatgatttgccgggccggctcgatcctgcgcat
caccgtggccgccgcatccgctctggcgtggcgcaatggctcgaactgcatccggcgcag
ccgcgttcccgttgggcgcaagagctggcgcaactggctgatcaggctctggacagcgtc
tccggctatctggtgaaccgctttggcgaggcgcaattggcgcaccgcctgccggagttg
ctggcggaaaatggtcaactgttcctcggcaatagcctggtcgtgcggttgattgacgcc
ttgacccgactgccggccggttatccggtcttcagcaatcgcggcgccagcggcatcgat
ggcctgatctctaccgcagcaggcgtacagcgtgcaacggccaaaccgacgctggcggtg
gtgggggatctctccgcgctctacgatctgaatgcgctggcgctgctgcggcagtgttct
gcgcccacggtgctgattgtggtgaataacaacggcggccagattttttcgctgttgccg
acgccgcaagaagatcgccagcgtttctactgcatgccgcaggacgtggatttcagccat
gccgcagcgatgttccaactgaactatgcgcggccggaaaactgggggcaactgaggcag
gcggtcgaacaaggctggcgtcacggcggcgctaccttgattgagctgcaggtgccgccg
agcgacggtgccgagacgttacggctcctggtgcaacaaatggcggtgcaatga
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