Serratia plymuthica 4Rx13: SOD_c32920
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Entry
SOD_c32920 CDS
T02710
Symbol
fadJ
Name
(GenBank) fatty acid oxidation complex subunit alpha
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl00071
Fatty acid degradation
srl00280
Valine, leucine and isoleucine degradation
srl00310
Lysine degradation
srl00362
Benzoate degradation
srl00380
Tryptophan metabolism
srl00410
beta-Alanine metabolism
srl00640
Propanoate metabolism
srl00650
Butanoate metabolism
srl00907
Pinene, camphor and geraniol degradation
srl00930
Caprolactam degradation
srl01100
Metabolic pathways
srl01110
Biosynthesis of secondary metabolites
srl01120
Microbial metabolism in diverse environments
srl01200
Carbon metabolism
srl01212
Fatty acid metabolism
Module
srl_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
SOD_c32920 (fadJ)
00650 Butanoate metabolism
SOD_c32920 (fadJ)
09103 Lipid metabolism
00071 Fatty acid degradation
SOD_c32920 (fadJ)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
SOD_c32920 (fadJ)
00310 Lysine degradation
SOD_c32920 (fadJ)
00380 Tryptophan metabolism
SOD_c32920 (fadJ)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
SOD_c32920 (fadJ)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
SOD_c32920 (fadJ)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SOD_c32920 (fadJ)
00930 Caprolactam degradation
SOD_c32920 (fadJ)
Enzymes [BR:
srl01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
SOD_c32920 (fadJ)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
SOD_c32920 (fadJ)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
SOD_c32920 (fadJ)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
AGO56257
LinkDB
All DBs
Position
complement(3699193..3701358)
Genome browser
AA seq
721 aa
AA seq
DB search
MSFENALHEQRAKPSAFQLTLRPDNIGVITIDVPGDKVNTLKAEFVEQVNDVLIRAQQHT
ALEGLVIISGKPDSFIAGADITMIAACTSAKEAETLAKKGQSTLAQIAAFPVPVVAAIHG
ACLGGGLELALACHGRVCSLDDKTALGLPEVQLGLLPGSGGTQRLPRLIGASKALDMMLT
GKHIRARQALRMGLVDDAVPQAILLQTAIERVKQGWQSRRELPWQERLLNGPLGKSLLFS
IVRKKTLEKTHGNYPAAEKIIQVVRTGLDSGSTSGYEAEARAFGELAMTPQSAALRSLFF
ASTALKKERGGNAQPHALHRVGILGGGLMGGGIACVTATRGGLPVRIKDVNETGITHALK
YSWDVLGKRVRSKRMRPAERQKQMMLISGSTDYTGFERVDIVVEAVFEDLALKQNMVAEI
EQHAAPHTIFASNTSSLPIGQIAAKAQRPQQVIGLHYFSPVDKMPLVEVIPHATTSEETI
ATTVALAHKQGKTAIVVADRAGFYVNRILAPYINEAARCLLEGEPIESLDKALVDFGFPV
GPITLLDEVGIDVGTKIIPVLVEQLGPRFAAPAAFDAVLKDGRKGRKNGRGFYLYPSEGQ
QRQRGKRADTSVYLLLGITPKSHLQPSVIAQRCVMMMLNEAARCLEEGVIRSARDGDIGA
VFGIGFPPFLGGPFRYMDELGAEKVVKTLQYLQQQYGENFAPCERLQRMAQQGERFYPQG
E
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgagctttgaaaacgcattgcatgaacagcgggccaaaccctcggcttttcaactgacg
ctgcgcccggacaacatcggcgtgattaccatcgacgtcccgggtgacaaggtcaatacg
ctgaaagccgagttcgtcgagcaggttaacgacgtactgatccgcgcgcaacagcatact
gcgctggaagggctggtgattatttcgggcaagccggattcgtttatcgccggggcggac
atcaccatgatcgccgcctgcaccagcgccaaagaggccgaaacgctggcgaagaaaggg
caaagcacgctggcgcagatcgccgctttcccggtgccggtggtggcggctattcacggc
gcttgcctcggtggcgggctggaactggctctggcttgccatggccgcgtttgttcgctg
gatgacaaaaccgctctcggcttgccggaagttcagcttggcctgctgccaggctccggc
ggcacccagcgcttgccacggttgatcggcgccagcaaggcgctggacatgatgctgacc
ggcaagcatatccgtgcgcgtcaggcgctgcggatgggactggttgacgatgcggtgccg
caggcgattttgttgcagaccgccattgaacgggtcaagcagggttggcagagccggcgt
gaactgccgtggcaggagcgcttgctcaacggtcctctggggaaaagcctgttgttcagc
attgtgcgcaaaaaaacgctggagaaaacccacggcaactatccggcggcggaaaaaatc
attcaggtggtgcgtaccggcctggacagcggcagcaccagcggttatgaagccgaagcg
cgggccttcggcgaactggccatgacgccgcagtcggcggcgttgcgcagcctgttcttt
gcctctaccgccttgaagaaagagcgcggcggcaatgcccaaccccatgcgttgcatcgc
gtcggcattctgggcggtggcctgatgggcggcgggattgcctgcgtaaccgccacgcgc
ggcggcctgccggtacgaattaaagacgtgaatgaaaccggcatcactcacgcgctgaaa
tacagctgggatgtgcttggcaagcgggtgcgcagcaaacgcatgcgcccggcggaacgg
caaaaacagatgatgctgatctccggctcgaccgattacaccggctttgaacgggtggat
atcgtggtggaggcggtgtttgaggatctggctctgaagcagaacatggtggccgagatt
gaacagcacgccgcgccgcataccattttcgcctccaatacctcgtcgttgccgattggc
cagattgccgccaaagcgcagcggccgcagcaggtgatcggcctgcattatttcagcccg
gtcgataaaatgccgctggtggaggtgatcccccatgccaccaccagcgaggaaaccatt
gccaccaccgtggcgctggcgcacaaacagggcaagacggccatcgtggtcgccgatcgc
gccggtttttacgtcaaccgcattctggctccttatataaatgaagcggcgcgttgtctg
ctggaaggcgaaccgatcgaatcgctggacaaggcgctggtggatttcggtttcccggtg
gggccgattaccctgcttgatgaagtgggcattgatgtaggcaccaagattatcccggtg
ttggtggaacagctagggccgcgtttcgccgcgccggccgccttcgatgcggtactgaaa
gacgggcgcaaagggcgtaaaaacggccggggtttctacctgtatccgagcgaaggtcag
caacgtcagcggggcaagcgcgccgatacttcggtatatcttctgctgggcatcacgccg
aagtcgcatttgcagccgtcggtcatcgcccagcgctgcgtaatgatgatgttgaatgaa
gcggcgcgttgcctggaagaaggcgtgatccgcagcgcacgcgatggggatatcggcgcg
gtattcggtatcggttttccgccgttcctcggggggccgttccgttatatggatgagctc
ggcgcagagaaggtggttaaaacgctgcaatacctgcagcagcaatacggcgaaaacttt
gccccctgcgaacgcttgcagcgcatggcgcagcagggcgaacgcttttatccgcaaggg
gagtga
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